RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 RHOFQ9HBH0 211 aa6.66□□□□□ -1.34
CTNND1-216ENST00000527467 WNT6Q9Y6F9 365 aa6.66□□□□□ -1.34
CTNND1-216ENST00000527467 CACNA1FO60840 1977 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 M0QZ24 198 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 HSD17B6O14756 317 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 PAPLNO95428 1278 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 IGHG1P01857 330 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 C1SP09871 688 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CTXN2P0C2S0 81 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CD1DP15813 335 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TACR1P25103 407 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 RABIFP47224 123 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 RRADP55042 308 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CLLU1Q5K131 121 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 SPANXN5Q5MJ07 72 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 PNPLA1Q8N8W4 532 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TMEM102Q8N9M5 508 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CDRT4Q8N9R6 151 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CHST14Q8NCH0 376 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ARRDC2Q8TBH0 407 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 STARD4Q96DR4 205 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 MS4A4EQ96PG1 132 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 MYADMQ96S97 322 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 LPAR4Q99677 370 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 MED17Q9NVC6 651 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF337Q9Y3M9 751 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 A3GALT2U3KPV4 340 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ACOD1A6NK06 481 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF716A6NP11 495 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 M0R3E3 92 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 F7P08709 466 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-216ENST00000527467 SFTA3P0C7M3 94 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 POU3F3P20264 500 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TNFRSF1BP20333 461 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 FPR3P25089 353 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 COMPP49747 757 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CLDN12P56749 244 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF91Q05481 1191 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TOMM34Q15785 309 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-216ENST00000527467 OR2A2Q6IF42 318 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 ADGRE4PQ86SQ3 457 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 FAM210BQ96KR6 192 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 SLC22A12Q96S37 553 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 VN1R3Q9BXE9 311 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TXLNGYQ9BZA5 131 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 TTYH3Q9C0H2 523 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 LHX3Q9UBR4 397 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 CACFD1Q9UGQ2 172 aa6.65□□□□□ -1.34
CTNND1-216ENST00000527467 NKX6-3A6NJ46 265 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 YJEFN3A6XGL0 299 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 H3BML4 177 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 GPR32O75388 356 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 FUCA1P04066 466 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CHRM2P08172 466 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CR2P20023 1033 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 GPR12P47775 334 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 INCA1Q0VD86 236 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 C11orf91Q3C1V1 193 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SLC36A2Q495M3 483 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 GLYATL3Q5SZD4 288 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 PM20D1Q6GTS8 502 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 FRMPD2BQ6IN97 320 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 DRAM2Q6UX65 266 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CLECL1Q8IZS7 167 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 ARFGAP1Q8N6T3 406 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SP7Q8TDD2 431 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-216ENST00000527467 ASB13Q8WXK3 278 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SLC30A3Q99726 388 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 GPR87Q9BY21 358 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 KCNK15Q9H427 330 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SPHK2Q9NRA0 654 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CYB5R1Q9UHQ9 305 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 NOCTQ9UK39 431 aaKnown RBP6.65□□□□□ -1.35
CTNND1-216ENST00000527467 NXT1Q9UKK6 140 aaKnown RBP6.65□□□□□ -1.35
CTNND1-216ENST00000527467 LIPGQ9Y5X9 500 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 TRAV36DV7A0A075B6V5 113 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 LOC100289279A0A1B0GTE1 492 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 F5H697 171 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 RAB27BO00194 218 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 LY86O95711 162 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 TPOP07202 933 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SLC6A11P48066 632 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CEBPDP49716 269 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-216ENST00000527467 RPS24P62847 133 aaKnown RBP6.65□□□□□ -1.35
CTNND1-216ENST00000527467 OR7A5Q15622 319 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 COX19Q49B96 90 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 CADM3Q8N126 398 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 NKAIN3Q8N8D7 197 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 C1orf127Q8N9H9 656 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 SLC46A1Q96NT5 459 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 PTDSS2Q9BVG9 487 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 BARHL1Q9BZE3 327 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 FAM206AQ9NX38 181 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 B3GAT1Q9P2W7 334 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 MIOXQ9UGB7 285 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 BTNL2Q9UIR0 455 aa6.65□□□□□ -1.35
CTNND1-216ENST00000527467 IFITM10A6NMD0 228 aa6.64□□□□□ -1.35
CTNND1-216ENST00000527467 DUX1O43812 170 aa6.64□□□□□ -1.35
CTNND1-216ENST00000527467 CST3P01034 146 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 342 ms