RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 OR1E2P47887 323 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 GSK3BP49841 420 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 RASSF2P50749 326 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
CPSF1-201ENST00000526271 BTG1P62324 171 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 LCN6P62502 163 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 TOP3AQ13472 1001 aaPredicted RBP11.95□□□□□ -0.5
CPSF1-201ENST00000526271 MOGQ16653 247 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 VMACQ2NL98 169 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ARMCX4Q5H9R4 360 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 FAM201AQ5SY85 155 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ERICH5Q6P6B1 374 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 HIST3H2AQ7L7L0 130 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 PATL1Q86TB9 770 aaKnown RBP11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ARHGAP24Q8N264 748 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 HIST1H2ACQ93077 130 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 MAN2C1Q9NTJ4 1040 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
CPSF1-201ENST00000526271 A4GNTQ9UNA3 340 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 STARD10Q9Y365 291 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 PLSCR5A0PG75 271 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 ELOVL7A1L3X0 281 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 TMEM178BH3BS89 294 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 H3BSA7 217 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 GYG2O15488 501 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 GSC2O15499 205 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 ENTPD5O75356 428 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 OR5F1O95221 314 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 GPANK1O95872 356 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 SELEP16581 610 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
CPSF1-201ENST00000526271 MMP16P51512 607 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 CD47Q08722 323 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 SAMD4BQ5PRF9 694 aaKnown RBP11.94□□□□□ -0.5
CPSF1-201ENST00000526271 SLC30A8Q8IWU4 369 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 ZNF420Q8TAQ5 688 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-201ENST00000526271 UPRTQ96BW1 309 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 SAMD8Q96LT4 415 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 ALG12Q9BV10 488 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 EGLN1Q9GZT9 426 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 ADA2Q9NZK5 511 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
CPSF1-201ENST00000526271 TRAV27A0A087WT01 109 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 H0YL77 283 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
CPSF1-201ENST00000526271 SLC3A1Q07837 685 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-201ENST00000526271 MIDNQ504T8 468 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 PGM2L1Q6PCE3 622 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 ASRGL1Q7L266 308 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 MICU2Q8IYU8 434 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 PARP8Q8N3A8 854 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 OR2T12Q8NG77 320 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 OR2Z1Q8NG97 314 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
CPSF1-201ENST00000526271 SLITRK2Q9H156 845 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 PRDM13Q9H4Q3 707 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 CYSLTR2Q9NS75 346 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 EIF3KQ9UBQ5 218 aaKnown RBP11.93□□□□□ -0.5
CPSF1-201ENST00000526271 TIMM10BQ9Y5J6 103 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 SNX13Q9Y5W8 968 aa11.93□□□□□ -0.5
CPSF1-201ENST00000526271 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 FFAR1O14842 300 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 MLNRO43193 412 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 FCN3O75636 299 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 DNAJC8O75937 253 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 DBHP09172 617 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 ANOS1P23352 680 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 LIPAP38571 399 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 IL13RA1P78552 427 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 HLXQ14774 488 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 VASH1Q7L8A9 365 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 SPICQ8N5J4 248 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 RNF148Q8N7C7 305 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 WFDC12Q8WWY7 111 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 TMIGD2Q96BF3 282 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 OR2V2Q96R30 315 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 DIRC2Q96SL1 478 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 KCTD14Q9BQ13 255 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 THTPAQ9BU02 230 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 TBCCD1Q9NVR7 557 aa11.92□□□□□ -0.5
CPSF1-201ENST00000526271 CGGBP1Q9UFW8 167 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-201ENST00000526271 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 A0A1W2PPL8 197 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 J3KTA2 159 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms