RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CHPT1Q8WUD6 406 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 DCLRE1CQ96SD1 692 aaKnown RBP8.83□□□□□ -1
VPS13B-212ENST00000524330 AMELYQ99218 206 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 SMAD5Q99717 465 aaKnown RBP8.83□□□□□ -1
VPS13B-212ENST00000524330 HDHD2Q9H0R4 259 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 DEFB127Q9H1M4 99 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 ZCCHC4Q9H5U6 513 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 EMC7Q9NPA0 242 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 BRD7Q9NPI1 651 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 ASH2LQ9UBL3 628 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 ING1Q9UK53 422 aaPredicted RBP8.83□□□□□ -1
VPS13B-212ENST00000524330 SPATA2Q9UM82 520 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 CAMK2AQ9UQM7 478 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 AK6Q9Y3D8 172 aaKnown RBP8.83□□□□□ -1
VPS13B-212ENST00000524330 PCDHGA9Q9Y5G4 932 aaKnown RBP8.83□□□□□ -1
VPS13B-212ENST00000524330 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 LHFPL6Q9Y693 200 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 AHCTF1Q8WYP5 2266 aa8.83□□□□□ -1
VPS13B-212ENST00000524330 A0A1W2PPK0 400 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 SMIM30A4D0T7 59 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PRR32B1ATL7 298 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 MKRN2OSH3BPM6 223 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 AIPO00170 330 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 EFSO43281 561 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 HPGDSO60760 199 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 MTRF1O75570 445 aaKnown RBP8.82□□□□□ -1
VPS13B-212ENST00000524330 NCR1O76036 304 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 TPPPO94811 219 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PTTG1O95997 202 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 IGHG3P01860 377 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 YES1P07947 543 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ZNF20P17024 532 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 FSTP19883 344 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 CTSSP25774 331 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 GNALP38405 381 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 KIR3DL2P43630 455 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 CX3CR1P49238 355 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 EVX1P49640 407 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 TPTEP56180 551 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 CAV3P56539 151 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 NHLH1Q02575 133 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 FOXC1Q12948 553 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 INSL4Q14641 139 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 RAB35Q15286 201 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 CEP78Q5JTW2 689 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 UBE2NLQ5JXB2 153 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ELFN2Q5R3F8 820 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 MZT2BQ6NZ67 158 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 CNIH2Q6PI25 160 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 IGFL3Q6UXB1 125 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 STAC2Q6ZMT1 411 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 DOK3Q7L591 496 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 COMMD2Q86X83 199 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ZNF100Q8IYN0 542 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ELMOD2Q8IZ81 293 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 SAMD12Q8N8I0 201 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 POC5Q8NA72 575 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 RAB40AQ8WXH6 277 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ITFG2Q969R8 447 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PHF21AQ96BD5 680 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 APH1AQ96BI3 265 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PGAM5Q96HS1 289 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 FOXB1Q99853 325 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ZNF416Q9BWM5 594 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PBOV1Q9GZY1 135 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 ZDHHC11Q9H8X9 412 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 BCO1Q9HAY6 547 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 DDX28Q9NUL7 540 aaKnown RBP8.82□□□□□ -1
VPS13B-212ENST00000524330 TBCCD1Q9NVR7 557 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 TMEM38BQ9NVV0 291 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 PLEK2Q9NYT0 353 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 EXTL2Q9UBQ6 330 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 NUFIP1Q9UHK0 495 aaKnown RBP8.82□□□□□ -1
VPS13B-212ENST00000524330 LAMA1P25391 3075 aa8.82□□□□□ -1
VPS13B-212ENST00000524330 KIAA1549Q9HCM3 1950 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 LOC107986453A0A1B0GWG9 222 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 SLC22A20A6NK97 555 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 IFITM5A6NNB3 132 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 H0YC42 278 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 AQP7O14520 342 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 MAGEB3O15480 346 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 RRP8O43159 456 aaKnown RBP8.81□□□□□ -1
VPS13B-212ENST00000524330 CRYABP02511 175 aaKnown RBP8.81□□□□□ -1
VPS13B-212ENST00000524330 CELA3AP09093 270 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 CDAP32320 146 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 PITPNBP48739 271 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 RIN1Q13671 783 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 ZNF169Q14929 603 aaPredicted RBP8.81□□□□□ -1
VPS13B-212ENST00000524330 FAM189A2Q15884 450 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 ODF4Q2M2E3 257 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 SLC36A2Q495M3 483 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 FAM27D1Q5T7N8 215 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 CORO6Q6QEF8 472 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 PGAP1Q75T13 922 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 SLC16A14Q7RTX9 510 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 LYSMD2Q8IV50 215 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 SERPINA12Q8IW75 414 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 CENPSQ8N2Z9 138 aa8.81□□□□□ -1
VPS13B-212ENST00000524330 IL17RDQ8NFM7 739 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms