RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	APMAP	Q9HDC9	416 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC17A5	Q9NRA2	495 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	COQ3	Q9NZJ6	369 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF69	Q9UC07	566 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	IL17B	Q9UHF5	180 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF337	Q9Y3M9	751 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	ADAM18	Q9Y3Q7	739 aa		7.03	□□□□□ -1.28
SPIDR-223	ENST00000524033	PRRC2C	Q9Y520	2896 aa	Known RBP	7.02	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	UTP20	O75691	2785 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033		A0A1B0GTI1	187 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	LOC101059948	A0A1B0GTJ6	334 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF860	A6NHJ4	632 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	LILRA5	A6NI73	299 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033		F5H5P2	479 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033		H0YGG7	62 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033		H3BUI4	141 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	TOX3	O15405	576 aa	Predicted RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	NKX2-8	O15522	239 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	DOK2	O60496	412 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	EIF4E2	O60573	245 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	HTR3B	O95264	441 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	HP	P00738	406 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	CSF1	P09603	554 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	UBB	P0CG47	229 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	UBC	P0CG48	685 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC35E2	P0CK97	266 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	PTHLH	P12272	177 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ICAM2	P13598	275 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF35	P13682	527 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	IL32	P24001	234 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	FAU	P35544	74 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	CDKN2A	P42771	156 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MAGEB1	P43366	347 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	KIR3DL2	P43630	455 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	PSMD4	P55036	377 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	GFER	P55789	205 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	CLDN12	P56749	244 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	H2BFS	P57053	126 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ARF3	P61204	181 aa	Predicted RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	RPS27A	P62979	156 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	UBA52	P62987	128 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	IL11RA	Q14626	422 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	DCAF12L2	Q5VW00	463 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	FAAP20	Q6NZ36	180 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ANKRD16	Q6P6B7	361 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	SERPINA12	Q8IW75	414 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR4E2	Q8NGC2	313 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR52R1	Q8NGF1	315 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR52B4	Q8NGK2	314 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR5M1	Q8NGP8	315 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR6K3	Q8NGY3	331 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	OIT3	Q8WWZ8	545 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MCHR2	Q969V1	340 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	RASD2	Q96D21	266 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MRPS24	Q96EL2	167 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	VSTM2L	Q96N03	204 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	NMNAT3	Q96T66	252 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MNT	Q99583	582 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZFYVE21	Q9BQ24	234 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	PELO	Q9BRX2	385 aa	Known RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ALG12	Q9BV10	488 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	ULBP3	Q9BZM4	244 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	WNT10A	Q9GZT5	417 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	FKRP	Q9H9S5	495 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	C12orf4	Q9NQ89	552 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	TAS2R8	Q9NYW2	309 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	STEAP1	Q9UHE8	339 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	PFDN2	Q9UHV9	154 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MOK	Q9UQ07	419 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	KLF2	Q9Y5W3	355 aa	Predicted RBP	7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	SESN1	Q9Y6P5	492 aa		7.02	□□□□□ -1.29
SPIDR-223	ENST00000524033	MYO18B	Q8IUG5	2567 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	TRAV8-7	A0A075B6U6	113 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	RFPL4A	A6NLU0	287 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ANXA2P2	A6NMY6	339 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	RFPL4AL1	F8VTS6	287 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	DNASE2	O00115	360 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	SULT1C2	O00338	296 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	CTAG2	O75638	210 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	TIAF1	O95411	115 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	CD14	P08571	375 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR8G3P	P0DMU2	310 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	MST1	P26927	711 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	PRPS1	P60891	318 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ERVK-25	P63136	954 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	LTB	Q06643	244 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	GPR18	Q14330	331 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	LY6G6F	Q5SQ64	297 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ALKAL2	Q6UX46	152 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	GSG1L	Q6UXU4	331 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	NUP54	Q7Z3B4	507 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ATG4D	Q86TL0	474 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF227	Q86WZ6	799 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	MCAT	Q8IVS2	390 aa	Known RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF440	Q8IYI8	595 aa		7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	MUC20	Q8N307	709 aa	Predicted RBP	7.01	□□□□□ -1.29
SPIDR-223	ENST00000524033	STPG2	Q8N412	459 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms