RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 C9orf135Q5VTT2 229 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 SLC16A14Q7RTX9 510 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 MRGPRGQ86SM5 289 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 CCDC36Q8IYA8 594 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF433Q8N7K0 673 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF610Q8N9Z0 462 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 OR13F1Q8NGS4 319 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 HTRA1Q92743 480 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 SLAMF6Q96DU3 332 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 MAP6Q96JE9 813 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 OPALINQ96PE5 141 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 MGLLQ99685 303 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 MROQ9BYG7 248 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 HDHD2Q9H0R4 259 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 OPN3Q9H1Y3 402 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 NIPAL2Q9H841 368 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 DDX28Q9NUL7 540 aaKnown RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 PGPEP1Q9NXJ5 209 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 BABAM2Q9NXR7 383 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 MRM2Q9UI43 246 aaKnown RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 GNG8Q9UK08 70 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 IKZF2Q9UKS7 526 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 INTS1Q8N201 2190 aaKnown RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 J3QLW9 94 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 LILRA1O75019 489 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 UBL3O95164 117 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 WNT11O96014 354 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 MMP7P09237 267 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF19P17023 458 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 DCTDP32321 178 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 OPRL1P41146 370 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 TGM4P49221 684 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 RIDAP52758 137 aaKnown RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 GBX2P52951 348 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 OR12D2P58182 307 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 MRPL49Q13405 166 aaKnown RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 DOC2BQ14184 412 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 RAB35Q15286 201 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 SLC36A2Q495M3 483 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 CCDC58Q4VC31 144 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 TP53I3Q53FA7 332 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 ARMCX4Q5H9R4 360 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 C1QTNF12Q5T7M4 302 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 OR7E24Q6IFN5 339 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 CORO6Q6QEF8 472 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 LRRN1Q6UXK5 716 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 KRT77Q7Z794 578 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 LRRC18Q8N456 261 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 OR10S1Q8NGN2 331 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 RPS4Y2Q8TD47 263 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 GATAD2BQ8WXI9 593 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 FBXO17Q96EF6 278 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 PELI1Q96FA3 418 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 SH3GL3Q99963 347 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 ISG20L2Q9H9L3 353 aaKnown RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 PNRC2Q9NPJ4 139 aaKnown RBP11.43□□□□□ -0.58
CPNE3-205ENST00000522240 ACOXLQ9NUZ1 547 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 SLCO1C1Q9NYB5 712 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF224Q9NZL3 707 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 POLEQ07864 2286 aa11.43□□□□□ -0.58
CPNE3-205ENST00000522240 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 ARPC4-TTLL3A0A0A6YYG9 625 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 CYSRT1A8MQ03 144 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 RER1O15258 196 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 SGCEO43556 437 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 LALBAP00709 142 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 H2BFMP0C1H6 154 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 CPEP16870 476 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF32P17041 273 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 PSMB1P20618 241 aaKnown RBP11.42□□□□□ -0.58
CPNE3-205ENST00000522240 BMP5P22003 454 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 GRB2P62993 217 aaKnown RBP11.42□□□□□ -0.58
CPNE3-205ENST00000522240 TPBGQ13641 420 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 GABRA6Q16445 453 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 TBRG1Q3YBR2 411 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 ELFN2Q5R3F8 820 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 LIPNQ5VXI9 398 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 MTFR2Q6P444 385 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 NCCRP1Q6ZVX7 275 aaPredicted RBP11.42□□□□□ -0.58
CPNE3-205ENST00000522240 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 SKA3Q8IX90 412 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 YIPF7Q8N8F6 280 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 RELL2Q8NC24 303 aaPredicted RBP11.42□□□□□ -0.58
CPNE3-205ENST00000522240 UFD1Q92890 307 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 COQ7Q99807 217 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 ELOVL3Q9HB03 270 aa11.42□□□□□ -0.58
CPNE3-205ENST00000522240 OBP2BQ9NPH6 170 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms