RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NLRC3Q7RTR2 1065 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 NKAIN3Q8N8D7 197 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 RASD2Q96D21 266 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 RAB3CQ96E17 227 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 CMSS1Q9BQ75 279 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 B3GALT5Q9Y2C3 310 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 TRIM77I1YAP6 450 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 TK1P04183 234 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 TAGLN2P37802 199 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 COX15Q7KZN9 410 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 RBM45Q8IUH3 476 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 SKA3Q8IX90 412 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 SLCO4A1Q96BD0 722 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 SEC22AQ96IW7 307 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 TSSK2Q96PF2 358 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 USB1Q9BQ65 265 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 CYB5R1Q9UHQ9 305 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 SOCS6O14544 535 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 DOK2O60496 412 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 SBK3P0C264 359 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 EPHA1P21709 976 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 ZP3P21754 424 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 LAP3P28838 519 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 HBG1P69891 147 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 HBG2P69892 147 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 ACOT7LQ6ZUV0 252 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 SLC25A37Q9NYZ2 338 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 GNG13Q9P2W3 67 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 PURGQ9UJV8 347 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 A0A0U1RQK1 487 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 ZNF891A8MT65 544 aaPredicted RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 LINC01387J3KSC0 135 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 MAGEB4O15481 346 aaPredicted RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 CPT2P23786 658 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 BAMBIQ13145 260 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 PFN4Q8NHR9 129 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 RNF170Q96K19 258 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 TMEM59Q9BXS4 323 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 PRDM7Q9NQW5 492 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 ACER3Q9NUN7 267 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 GHRLQ9UBU3 117 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 EXO1Q9UQ84 846 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 HLA-HP01893 362 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 GABRB1P18505 474 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 ALKBH1Q13686 389 aaKnown RBP14.73□□□□□ -0.05
USP42-207ENST00000521713 TCTN1Q2MV58 587 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 B3GLCTQ6Y288 498 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 IL1F10Q8WWZ1 152 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 C11orf40Q8WZ69 217 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 LIN7BQ9HAP6 207 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 PROCRQ9UNN8 238 aa14.73□□□□□ -0.05
USP42-207ENST00000521713 COL4A1P02462 1669 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 ANKRD31Q8N7Z5 1873 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 A0A1B0GUH1 482 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 ACOD1A6NK06 481 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 OR4D6Q8NGJ1 314 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 OR6M1Q8NGM8 313 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 SGK3Q96BR1 496 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 UHRF2Q96PU4 802 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 EGLN1Q9GZT9 426 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 POLR2AP24928 1970 aaKnown RBP14.72□□□□□ -0.05
USP42-207ENST00000521713 TNS1Q9HBL0 1735 aaKnown RBP14.72□□□□□ -0.05
USP42-207ENST00000521713 C17orf112F2Z3M2 114 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 KIR2DL1P43626 348 aaPredicted RBP14.72□□□□□ -0.05
USP42-207ENST00000521713 HEPHL1Q6MZM0 1159 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 ADAM5Q6NVV9 412 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 UQCC3Q6UW78 93 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 DECR2Q9NUI1 292 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 COA3Q9Y2R0 106 aaPredicted RBP14.72□□□□□ -0.05
USP42-207ENST00000521713 HDGFL3Q9Y3E1 203 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 LOC100289279A0A1B0GTE1 492 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 hCG_1809904A0A1W2PP81 198 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 A0A1W2PPE2 198 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 A0A1W2PR64 198 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 A0A1W2PRV1 198 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 LRRC30A6NM36 301 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 DCXRQ7Z4W1 244 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 RDH10Q8IZV5 341 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 LIPHQ8WWY8 451 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 RNF212BA8MTL3 300 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 PRAMEF4O60810 478 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 GPX5O75715 221 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 TGM1P22735 817 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 ARIH2OSQ8N7S6 290 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 TXN2Q99757 166 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 CTSFQ9UBX1 484 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 OR52A1Q9UKL2 312 aa14.72□□□□□ -0.05
USP42-207ENST00000521713 CEP290O15078 2479 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 BHLHE40O14503 412 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 CYB5BO43169 146 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 CD160O95971 181 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 CD1EP15812 388 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 SCGB2A2Q13296 93 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 KANSL1Q7Z3B3 1105 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 PRSS42Q7Z5A4 293 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 SLC22A24Q8N4F4 322 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 PCDHGA1Q9Y5H4 931 aa14.71□□□□□ -0.05
USP42-207ENST00000521713 SCN1AP35498 2009 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms