RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SYNDIG1LA6NDD5 238 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CCDC182A6NF36 153 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 FAM183AA6NL82 134 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TTC36A6NLP5 189 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 SNTNA6NMZ2 147 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CHP2O43745 196 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 LALBAP00709 142 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CLEC2LP0C7M8 214 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PEPDP12955 493 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 MYL12AP19105 171 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PGCP20142 388 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CD40LGP29965 261 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 HTR1FP30939 366 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC1A3P43003 542 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PSMD7P51665 324 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PPP5CP53041 499 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PSMD4P55036 377 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 WNT4P56705 351 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 RPS25P62851 125 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 DBPQ10586 325 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 BIKQ13323 160 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PON3Q15166 354 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TIMM50Q3ZCQ8 353 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 LIPKQ5VXJ0 399 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 NXNL2Q5VZ03 156 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PLBD1Q6P4A8 553 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 GDPGP1Q6ZNW5 385 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 MEPCEQ7L2J0 689 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 DOK3Q7L591 496 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 UBQLNLQ8IYU4 475 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CDK20Q8IZL9 346 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CADM2Q8N3J6 435 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 LNX2Q8N448 690 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 BPIFB2Q8N4F0 458 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM99Q8N816 258 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZFP41Q8N8Y5 198 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 OR2T33Q8NG76 320 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 OR7G1Q8NGA0 311 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 OR4C3Q8NH37 302 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 SPRYD4Q8WW59 207 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PTP4A1Q93096 173 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF48Q96MX3 618 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PELOQ9BRX2 385 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 HCAR1Q9BXC0 346 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TEX12Q9BXU0 123 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 MROQ9BYG7 248 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 BARHL1Q9BZE3 327 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 Q9N2J8 555 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 G6PC2Q9NQR9 355 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 NDUFB11Q9NX14 153 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 CHCHD3Q9NX63 227 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ETAA1Q9NY74 926 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 H2AFY2Q9P0M6 372 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 PRODH2Q9UF12 536 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ICAM5Q9UMF0 924 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 SSR3Q9UNL2 185 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF175Q9Y473 711 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 OR10H1Q9Y4A9 318 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 A0A075B6Q4 140 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 PNMA8CA0A1B0GUJ8 204 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF670-ZNF695F2Z2N8 137 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 J3QRE1 110 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 CTDSP2O14595 271 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SS18L1O75177 396 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 IL33O95760 270 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 CSTAP01040 98 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 KNG1P01042 644 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 MSMBP08118 114 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OCM2P0CE71 109 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OCMP0CE72 109 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SELEP16581 610 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TCEA1P23193 301 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 GTF2E2P29084 291 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 RBM34P42696 430 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 PPICP45877 212 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TGM4P49221 684 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 RIN1Q13671 783 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 C1DQ13901 141 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 RGS21Q2M5E4 152 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM44Q2T9K0 475 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF544Q6NX49 715 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 NIPAL3Q6P499 406 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SMARCD3Q6STE5 483 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 APOOLQ6UXV4 268 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 C17orf107Q6ZR85 190 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 CMIPQ8IY22 773 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 LSMEM1Q8N8F7 131 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 GATSQ8NAP1 163 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms