RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PHLPP2Q6ZVD8 1323 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 TMEM179Q6ZVK1 233 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 ABHD12BQ7Z5M8 362 aaPredicted RBP3.06□□□□□ -1.92
SKP1-208ENST00000521216 PLEKHH2Q8IVE3 1493 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 H1FOOQ8IZA3 346 aaPredicted RBP3.06□□□□□ -1.92
SKP1-208ENST00000521216 FAM86B1Q8N7N1 296 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 ZNF680Q8NEM1 530 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 RASSF5Q8WWW0 418 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 HAUS1Q96CS2 278 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 TUBGCP3Q96CW5 907 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 OPALINQ96PE5 141 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 SIKE1Q9BRV8 207 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 ANKRD30AQ9BXX3 1397 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 RPF2Q9H7B2 306 aaKnown RBP3.06□□□□□ -1.92
SKP1-208ENST00000521216 MRM3Q9HC36 420 aaKnown RBP3.06□□□□□ -1.92
SKP1-208ENST00000521216 GID8Q9NWU2 228 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 IKZF2Q9UKS7 526 aa3.06□□□□□ -1.92
SKP1-208ENST00000521216 CASZ1Q86V15 1759 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 COL4A4P53420 1690 aaPredicted RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 IFT140Q96RY7 1462 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 RAB3GAP2Q9H2M9 1393 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 A0A1B0GVG6 124 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 FAM240BA0A1B0GVZ2 78 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 A0A1W2PP18 115 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 A0A1W2PPV9 198 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 OR6C74A6NCV1 312 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 RAD51BO15315 384 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 EIF3GO75821 320 aaKnown RBP eCLIP3.05□□□□□ -1.92
SKP1-208ENST00000521216 WISP3O95389 354 aaPredicted RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 CTDNEP1O95476 244 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 FGGP02679 453 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 ASGR1P07306 291 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 SNRPAP09012 282 aaKnown RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 PGAM1P18669 254 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 NCF2P19878 526 aaPredicted RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 OMGP23515 440 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 IFNA8P32881 189 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 PHBP35232 272 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 HSPA9P38646 679 aaKnown RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 PSMC5P62195 406 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 BEX3Q00994 111 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 CUL2Q13617 745 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 DOC2AQ14183 400 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 TGFBIQ15582 683 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 FAM83EQ2M2I3 478 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 MAJINQ3KP22 176 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 CCDC58Q4VC31 144 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 TTMPQ5BVD1 217 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 HES5Q5TA89 166 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 ERICH5Q6P6B1 374 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 ZNF493Q6ZR52 646 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 PEX26Q7Z412 305 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 CLVS1Q8IUQ0 354 aaPredicted RBP3.05□□□□□ -1.92
SKP1-208ENST00000521216 ZNF695Q8IW36 515 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 PGAM4Q8N0Y7 254 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 TTLQ8NG68 377 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 NELFBQ8WX92 580 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 TMEM54Q969K7 222 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 NDFIP1Q9BT67 221 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 TIPINQ9BVW5 301 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 OR51B5Q9H339 312 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 NTN4Q9HB63 628 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 NMRK1Q9NWW6 199 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 RHBDL2Q9NX52 303 aa3.05□□□□□ -1.92
SKP1-208ENST00000521216 WDR97A6NE52 1622 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 SHROOM2Q13796 1616 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CCDC88BA6NC98 1476 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 GOLGA3Q08378 1498 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 TCOF1Q13428 1488 aaKnown RBP3.04□□□□□ -1.92
SKP1-208ENST00000521216 NUP160Q12769 1436 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CPDO75976 1380 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CARMIL3Q8ND23 1372 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 TTC21AQ8NDW8 1320 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 A0A0B4J2A0 478 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 EFCAB10A6NFE3 127 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 HSBP1L1C9JCN9 74 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 F6UB75 175 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 INS-IGF2F8WCM5 200 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CXCL11O14625 94 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 ATP6V1G2O95670 118 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 TMEM50AO95807 157 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 SERPINA3P01011 423 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 IL6P05231 212 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 FABP3P05413 133 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 SERPIND1P05546 499 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 IGFBP3P17936 291 aaPredicted RBP3.04□□□□□ -1.92
SKP1-208ENST00000521216 CASP14P31944 242 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 SERPINB5P36952 375 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 MYL6P60660 151 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 KCNJ2P63252 427 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 HPCAP84074 193 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 ECH1Q13011 328 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 DMC1Q14565 340 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 UBE2SQ16763 222 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 OAFQ86UD1 273 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 FAM228AQ86W67 206 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 UBE2J2Q8N2K1 259 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 HSD17B11Q8NBQ5 300 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 OR5W2Q8NH69 310 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms