RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 UNC50Q53HI1 259 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TEX30Q5JUR7 227 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 OLFML2AQ68BL7 652 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF470Q6ECI4 717 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ATRAIDQ6UW56 229 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CES3Q6UWW8 571 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RNF165Q6ZSG1 346 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EFL1Q7Z2Z2 1120 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SNX20Q7Z614 316 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 DEFB132Q7Z7B7 95 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CMC1Q7Z7K0 106 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 COMMD7Q86VX2 200 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 MFSD6LQ8IWD5 586 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF683Q8IZ20 524 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 STPG2Q8N412 459 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SVOPLQ8N434 492 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NPWQ8N729 165 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 FAM86B1Q8N7N1 296 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RTL3Q8N8U3 475 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF565Q8N9K5 539 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 DNAAF3Q8N9W5 541 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 OR9I1Q8NGQ6 314 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 OR8K3Q8NH51 312 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CDC26Q8NHZ8 85 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TEX47Q8TBZ9 253 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 KCTD4Q8WVF5 259 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 DNAJB3Q8WWF6 145 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NDRG1Q92597 394 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 FCGR1BQ92637 280 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 KIAA1143Q96AT1 154 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 LRRC58Q96CX6 371 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 IMP4Q96G21 291 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SMARCD1Q96GM5 515 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 HYLS1Q96M11 299 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TSNARE1Q96NA8 513 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 APOL4Q9BPW4 351 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TBL1YQ9BQ87 522 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SLC30A2Q9BRI3 323 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ULBP1Q9BZM6 244 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SLC25A51Q9H1U9 297 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 MFSD1Q9H3U5 465 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NXF3Q9H4D5 531 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 C8orf33Q9H7E9 229 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SYNDIG1Q9H7V2 258 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 GORASP2Q9H8Y8 452 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SLC25A19Q9HC21 320 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CCNB1IP1Q9NPC3 277 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EXD2Q9NVH0 621 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 LYARQ9NX58 379 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 VNN3Q9NY84 501 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CYB5R1Q9UHQ9 305 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 KIF25Q9UIL4 384 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PURGQ9UJV8 347 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 LSM2Q9Y333 95 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NDUFAF1Q9Y375 327 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SAMHD1Q9Y3Z3 626 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 HSPB11Q9Y547 144 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NINQ8N4C6 2090 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CCDC88CQ9P219 2028 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SCN8AQ9UQD0 1980 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 GREB1Q4ZG55 1949 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PLXNA1Q9UIW2 1896 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PAPPA2Q9BXP8 1791 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 MYO10Q9HD67 2058 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 NPIPA5A0A0B4J1W7 369 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TRABD2BA6NFA1 517 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ARL5CA6NH57 179 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PCP4L1A6NKN8 68 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 FAM74A7A6NL05 159 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 WASHC1A8K0Z3 465 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 NPIPA5E9PKD4 350 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CLDN5O00501 218 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 UBDO15205 165 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 HCRTO43612 131 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CHP2O43745 196 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 VEGFDO43915 354 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 AIREO43918 545 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TPST1O60507 370 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 HCN1O60741 890 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF354AO60765 605 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 VPS26AO75436 327 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PSIP1O75475 530 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 APOA1P02647 267 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 IFNA4P05014 189 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 HOXC4P09017 264 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF286BP0CG31 522 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SMIM6P0DI80 62 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 POU2F1P14859 743 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SPI1P17947 270 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 GGT1P19440 569 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 OGNP20774 298 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ATP5C1P36542 298 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RGS6P49758 472 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CNN1P51911 297 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 BLVRAP53004 296 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ARFIP1P53367 373 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CRISP3P54108 245 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CASP9P55211 416 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TAS2R39P59534 338 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms