RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
SDC2-203ENST00000519587 LRBAP50851 2863 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 FBN2P35556 2912 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 A0A1W2PR80 420 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 CASKO14936 926 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 RER1O15258 196 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 IGHA1P01876 353 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 SERPINA5P05154 406 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 COX5BP10606 129 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ALOX5APP20292 161 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 CRHBPP24387 322 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 EEF1B2P24534 225 aaKnown RBP12.32□□□□□ -0.44
SDC2-203ENST00000519587 APLNRP35414 380 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
SDC2-203ENST00000519587 HTR5AP47898 357 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 IDH3GP51553 393 aaPredicted RBP12.32□□□□□ -0.44
SDC2-203ENST00000519587 RIPPLY3P57055 190 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 GABARAPL2P60520 117 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 GRB2P62993 217 aaKnown RBP12.32□□□□□ -0.44
SDC2-203ENST00000519587 HIST1H3AP68431 136 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 EGR3Q06889 387 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ST3GAL4Q11206 333 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 HIST2H3PS2Q5TEC6 136 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 TMEM154Q6P9G4 183 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 CFAP77Q6ZQR2 320 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 HIST2H3AQ71DI3 136 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 RHOUQ7L0Q8 258 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 FAM220AQ7Z4H9 259 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 OR1J2Q8NGS2 313 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 GGHQ92820 318 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 SLAMF6Q96DU3 332 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
SDC2-203ENST00000519587 TBX5Q99593 518 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 COQ7Q99807 217 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ATF6BQ99941 703 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 JAM3Q9BX67 310 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 WNT5BQ9H1J7 359 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 CENPEQ02224 2701 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 ICE1Q9Y2F5 2266 aa12.32□□□□□ -0.44
SDC2-203ENST00000519587 A0A1W2PQL4 384 aaPredicted RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 OR6C6A6NF89 314 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 PTGES3LE9PB15 166 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 RGS10O43665 173 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 APOC1P02654 83 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 KRT8P05787 483 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 HSD11B1P28845 292 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 GDI2P50395 445 aaKnown RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 ZNF83P51522 516 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 CHN2P52757 468 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 SLC35A2P78381 396 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 PSG4Q00888 419 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 KCTD21Q4G0X4 260 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 ZNF774Q6NX45 483 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 TMEM108Q6UXF1 575 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 PLEKHG7Q6ZR37 379 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 VASH1Q7L8A9 365 aaPredicted RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 KRT77Q7Z794 578 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 IL17RDQ8NFM7 739 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 OR1F12Q8NHA8 337 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 FAM222BQ8WU58 562 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 SNX33Q8WV41 574 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 RNF133Q8WVZ7 376 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 MROQ9BYG7 248 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 NIPAL2Q9H841 368 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 CENPMQ9NSP4 180 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 DDX28Q9NUL7 540 aaKnown RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 FKBP14Q9NWM8 211 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 CRNNQ9UBG3 495 aaPredicted RBP12.31□□□□□ -0.44
SDC2-203ENST00000519587 IKZF2Q9UKS7 526 aa12.31□□□□□ -0.44
SDC2-203ENST00000519587 J3QRE1 110 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 M0R1B8 84 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 MYL12BO14950 172 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 SYNGR3O43761 229 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 ZNF254O75437 659 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 CDK1P06493 297 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 RNF224P0DH78 156 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 EPXP11678 715 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 PSKH1P11801 424 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 PTAFRP25105 342 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 STOMP27105 288 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms