RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 FOXF1Q12946 379 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 EBPQ15125 230 aaKnown RBP10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 BEX5Q5H9J7 111 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 TMEM81Q6P7N7 255 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 ATG4DQ86TL0 474 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 OR4K15Q8NH41 348 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 STK35Q8TDR2 534 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 TCEAL3Q969E4 200 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 ICAM5Q9UMF0 924 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 TMEM235A6NFC5 223 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 GGT3PA6NGU5 568 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 HSPB2A8KAH6 182 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 RECKO95980 971 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 LPLP06858 475 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 CTSBP07858 339 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC37A1P57057 533 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 CEBPEQ15744 281 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 HSPB2Q16082 182 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 WDR38Q5JTN6 314 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 SIGIRRQ6IA17 410 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 MAMSTRQ6ZN01 415 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 DCUN1D4Q92564 292 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 LRRC46Q96FV0 321 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 B3GALT5Q9Y2C3 310 aa10.17□□□□□ -0.78
PCDHGB4-201ENST00000519479 SHISA8B8ZZ34 492 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SGCEO43556 437 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 GMDSO60547 372 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 GDF1P27539 372 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC6A1P30531 599 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 VAMP2P63027 116 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 OR51E1Q8TCB6 317 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC25A21Q9BQT8 299 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 PPP1R3EQ9H7J1 279 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 DVL2O14641 736 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 B3GALNT1O75752 331 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 TPPPO94811 219 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 NAGAP17050 411 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 UBE2MP61081 183 aaKnown RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 CLVS2Q5SYC1 327 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 ZNF100Q8IYN0 542 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 PTPMT1Q8WUK0 201 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC25A43Q8WUT9 341 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC22A11Q9NSA0 550 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 NTMQ9P121 344 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 PISDQ9UG56 409 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 R4GMQ9 66 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 A6NCN8 305 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 CD3DP04234 171 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 POU3F2P20265 443 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 MPLP40238 635 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 C4orf45Q96LM5 186 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SPACA5Q96QH8 159 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 DHRS9Q9BPW9 319 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 ARRDC1-AS1Q9H2J1 176 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 EXOSC3Q9NQT5 275 aaKnown RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 OR5V1Q9UGF6 321 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 MRM2Q9UI43 246 aaKnown RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 C1orf196B1AJZ1 125 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 FCGR2AP12318 317 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 MAP2K6P52564 334 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 LINC00303Q3SY05 128 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 DCAF12Q5T6F0 453 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 GLIPR1L1Q6UWM5 242 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 RPS19BP1Q86WX3 136 aaKnown RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 CARFQ8N187 725 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 TEX19Q8NA77 164 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 OR56B1Q8NGI3 324 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 YIPF5Q969M3 257 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 TMEM74BQ9NUR3 256 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 SF3B6Q9Y3B4 125 aaKnown RBP10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 PCDHGA5Q9Y5G8 931 aa10.16□□□□□ -0.78
PCDHGB4-201ENST00000519479 OIP5O43482 229 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 XRCC3O43542 346 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 QDPRP09417 244 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 FXYD4P59646 89 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 FMODQ06828 376 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 CD200R1LQ6Q8B3 271 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 GABRG1Q8N1C3 465 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 GTPBP8Q8N3Z3 284 aaPredicted RBP10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 HSD17B8Q92506 261 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 CDCP1Q9H5V8 836 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 LRP12Q9Y561 859 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 A0A1B0GUH1 482 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 H7C417 338 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 HSPA12AO43301 675 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 EIF1BO60739 113 aaKnown RBP10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 THY1P04216 161 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 GAAP10253 952 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 ALOX5APP20292 161 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 SKP2Q13309 424 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 MFAP5Q13361 173 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 SLC9A3R2Q15599 337 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 FHL5Q5TD97 284 aa10.15□□□□□ -0.78
PCDHGB4-201ENST00000519479 RFLNBQ8N5W9 214 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms