RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SRMP19623 302 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 CCR9P51686 369 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 RIDAP52758 137 aaKnown RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 MFGE8Q08431 387 aaPredicted RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 OXA1LQ15070 435 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 Q499Y3 187 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 ABLIM2Q6H8Q1 611 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 RDH10Q8IZV5 341 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 OR10AC1Q8NH08 325 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 KCTD12Q96CX2 325 aaKnown RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 SOSTQ9BQB4 213 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 CCDC32Q9BV29 185 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 SRRQ9GZT4 340 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 SLC25A18Q9H1K4 315 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PAQR5Q9NXK6 330 aaPredicted RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 DAPK2Q9UIK4 370 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 SLC22A13Q9Y226 551 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 ATMQ13315 3056 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 ISPDA4D126 451 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 ZNF254O75437 659 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 ZNF432O94892 652 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
CLN8-204ENST00000519254 CDAP32320 146 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 EVX1P49640 407 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 LY6DQ14210 128 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 KCNMB1Q16558 191 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PHYHD1Q5SRE7 291 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 ZNF676Q8N7Q3 588 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 IL17RDQ8NFM7 739 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 OR10H5Q8NGA6 315 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 RNF133Q8WVZ7 376 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 TMEM54Q969K7 222 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 GPR137Q96N19 417 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 GFI1Q99684 422 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 PRDM14Q9GZV8 571 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 COMMD4Q9H0A8 199 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 EMC7Q9NPA0 242 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 POLE4Q9NR33 117 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 GLTPQ9NZD2 209 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 FBXL3Q9UKT7 428 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 LHFPL6Q9Y693 200 aa12.79□□□□□ -0.36
CLN8-204ENST00000519254 BOD1L1Q8NFC6 3051 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 FABP12A6NFH5 140 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 CYTIPO60759 359 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 TMCC2O75069 709 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 EPXP11678 715 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 ZNF133P52736 654 aaPredicted RBP12.78□□□□□ -0.36
CLN8-204ENST00000519254 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 CNIH2Q6PI25 160 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 XKRXQ6PP77 449 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 DEGS2Q6QHC5 323 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 FAM131AQ6UXB0 335 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 OR10S1Q8NGN2 331 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 HTRA1Q92743 480 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
CLN8-204ENST00000519254 C14orf119Q9NWQ9 140 aa12.78□□□□□ -0.36
CLN8-204ENST00000519254 AK6Q9Y3D8 172 aaKnown RBP12.78□□□□□ -0.36
CLN8-204ENST00000519254 TRBV5-7A0A0A0MS05 114 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 SLC22A20A6NK97 555 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 ZNF716A6NP11 495 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 GPR171O14626 319 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 OCM2P0CE71 109 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 OCMP0CE72 109 aaPredicted RBP12.77□□□□□ -0.36
CLN8-204ENST00000519254 ATF1P18846 271 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 ELK1P19419 428 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 SOX2P48431 317 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 CSNK1A1P48729 337 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 KLRB1Q12918 225 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 TRIM16LQ309B1 348 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 FGD2Q7Z6J4 655 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 GPR148Q8TDV2 347 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.36
CLN8-204ENST00000519254 TRIB1Q96RU8 372 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 CLEC4AQ9UMR7 237 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 R4GMQ9 66 aa12.77□□□□□ -0.36
CLN8-204ENST00000519254 PIEZO2Q9H5I5 2752 aa12.77□□□□□ -0.37
CLN8-204ENST00000519254 SLC19A2O60779 497 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 PAHP00439 452 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 AZGP1P25311 298 aaKnown RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
CLN8-204ENST00000519254 NTF4P34130 210 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 SELENOPP49908 381 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 BAK1Q16611 211 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 ZNF585AQ6P3V2 769 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 CFAP77Q6ZQR2 320 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 P4HA3Q7Z4N8 544 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 MCEMP1Q8IX19 187 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 OR6N1Q8NGY5 312 aa12.76□□□□□ -0.37
CLN8-204ENST00000519254 SLAMF6Q96DU3 332 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms