RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ULBP3Q9BZM4 244 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 AKIRIN1Q9H9L7 192 aaPredicted RBP16.43■□□□□ 0.22
SDC2-202ENST00000518385 COPS3Q9UNS2 423 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 MUC6Q6W4X9 2439 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 LOC102723996A0A087X1L8 192 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 IGHV3-20A0A0C4DH32 117 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 ATP6V1G2-DDX39BF2Z307 99 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 FLI1Q01543 452 aaPredicted RBP16.43■□□□□ 0.22
SDC2-202ENST00000518385 EGR4Q05215 589 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 EIF3IQ13347 325 aaKnown RBP16.43■□□□□ 0.22
SDC2-202ENST00000518385 BTN1A1Q13410 526 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 LINC01590Q5TEZ4 76 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 HES3Q5TGS1 186 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 JAZF1Q86VZ6 243 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 RFLNBQ8N5W9 214 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 C10orf53Q8N6V4 93 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 LRRC75AQ8NAA5 344 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 STK35Q8TDR2 534 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 ALG12Q9BV10 488 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 DDA1Q9BW61 102 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 RTN4RQ9BZR6 473 aa16.43■□□□□ 0.22
SDC2-202ENST00000518385 MRPL15Q9P015 296 aaKnown RBP16.43■□□□□ 0.22
SDC2-202ENST00000518385 SPEGQ15772 3267 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 TRBV11-1A0A0K0K1C0 115 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 GGT3PA6NGU5 568 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 NUDT19A8MXV4 375 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 TEX46H3BTG2 121 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 PYCARD-AS1I3L0S3 204 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 ARPC5O15511 151 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 MTRF1O75570 445 aaKnown RBP16.42■□□□□ 0.22
SDC2-202ENST00000518385 SLC25A12O75746 678 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 OR2F2O95006 317 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 CD8AP01732 235 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 LPLP06858 475 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 MSX1P28360 303 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 MPGP29372 298 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 DCTDP32321 178 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 OR2F1Q13607 317 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 ZMYND11Q15326 602 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 PCGF3Q3KNV8 242 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 ZNF454Q8N9F8 522 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 EXD3Q8N9H8 876 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 COQ8AQ8NI60 647 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 RGP1Q92546 391 aaPredicted RBP16.42■□□□□ 0.22
SDC2-202ENST00000518385 IFT46Q9NQC8 304 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 PISDQ9UG56 409 aa16.42■□□□□ 0.22
SDC2-202ENST00000518385 A0A1W2PNU3 283 aaPredicted RBP16.41■□□□□ 0.22
SDC2-202ENST00000518385 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 TMEM200CA6NKL6 621 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 A8MVM7 634 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 C9J4A7 227 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 SELENOFO60613 162 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 UPK3AO75631 287 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 NUDT14O95848 222 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 JMJD7P0C870 316 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 VSIG10L2P0DP72 767 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 SLC25A4P12235 298 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 CSRP1P21291 193 aaKnown RBP16.41■□□□□ 0.22
SDC2-202ENST00000518385 PSMB10P40306 273 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 TAS2R19P59542 299 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 ALG10Q5BKT4 473 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 ASCL5Q7RTU5 278 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 MAMDC2Q7Z304 686 aaPredicted RBP16.41■□□□□ 0.22
SDC2-202ENST00000518385 CDC20BQ86Y33 519 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 TMEM229BQ8NBD8 167 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 PXT1Q8NFP0 134 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 OR52H1Q8NGJ2 320 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 OR4C16Q8NGL9 310 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 OR1S1Q8NH92 325 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 SLC22A8Q8TCC7 542 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 TNFAIP8L1Q8WVP5 186 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 MFFQ9GZY8 342 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 SLC25A18Q9H1K4 315 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 SDHAF3Q9NRP4 125 aa16.41■□□□□ 0.22
SDC2-202ENST00000518385 CUL9Q8IWT3 2517 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 PMS2P1A4D2B8 440 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 OR2T1O43869 369 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 ABHD16AO95870 558 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 ITGB2P05107 769 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 FTH1P19P0C7X4 201 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 SDHAP31040 664 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 PRSS3P35030 304 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 FOXL2P58012 376 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 ZNF660Q6AZW8 331 aaPredicted RBP16.4■□□□□ 0.22
SDC2-202ENST00000518385 OR6K6Q8NGW6 343 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 DUSP19Q8WTR2 217 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 MR1Q95460 341 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 KTI12Q96EK9 354 aaPredicted RBP16.4■□□□□ 0.22
SDC2-202ENST00000518385 CXorf58Q96LI9 332 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 ADAD1Q96M93 576 aaKnown RBP16.4■□□□□ 0.22
SDC2-202ENST00000518385 SPRY4Q9C004 299 aa16.4■□□□□ 0.22
SDC2-202ENST00000518385 FXYD6-FXYD2A0A087WZ82 144 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 TMED7-TICAM2A0A0A6YYA0 188 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 SPAARA0A1B0GVQ0 90 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 OR6C68A6NDL8 312 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 BLOC1S5-TXNDC5H3BN57 136 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 ADAM10O14672 748 aa16.39■□□□□ 0.21
SDC2-202ENST00000518385 TM4SF5O14894 197 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms