RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 WIPI1Q5MNZ9 446 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-210ENST00000517713 RSBN1Q5VWQ0 802 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-210ENST00000517713 KRT74Q7RTS7 529 aa23.53■■□□□ 1.36
COL13A1-210ENST00000517713 PRSS45Q7RTY3 260 aa23.53■■□□□ 1.36
COL13A1-210ENST00000517713 SERPINA12Q8IW75 414 aa23.53■■□□□ 1.36
COL13A1-210ENST00000517713 NCKAP5O14513 1909 aa23.53■■□□□ 1.36
COL13A1-210ENST00000517713 TTLL8A6PVC2 850 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 ZNF878C9JN71 531 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 WDPCPO95876 746 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 FSTP19883 344 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 ITGA3P26006 1051 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 GDF1P27539 372 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 GGNQ86UU5 652 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 TAS2R4Q9NYW5 299 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 ABI3Q9P2A4 366 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 ASH2LQ9UBL3 628 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 CACNG2Q9Y698 323 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 P2RY10O00398 339 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 SMAD9O15198 467 aaKnown RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 IGFBP3P17936 291 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 CSRP1P21291 193 aaKnown RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 SRP9P49458 86 aaKnown RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 CARD18P57730 90 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 FOXO1Q12778 655 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 RHOUQ7L0Q8 258 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 HAVCR1Q96D42 359 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 IP6K3Q96PC2 410 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 SF3B5Q9BWJ5 86 aaKnown RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 B3GNT4Q9C0J1 378 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 OR2B2Q9GZK3 357 aa23.52■■□□□ 1.36
COL13A1-210ENST00000517713 BOKQ9UMX3 212 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-210ENST00000517713 DOCK10Q96BY6 2186 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 NEURL1O76050 574 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 PHYHD1Q5SRE7 291 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 C10orf128Q5T292 105 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 LINGO2Q7L985 606 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 TMEM123Q8N131 208 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 TOMM5Q8N4H5 51 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 ZIC4Q8N9L1 334 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 SMIM4Q8WVI0 70 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 UTP23Q9BRU9 249 aaKnown RBP23.51■■□□□ 1.35
COL13A1-210ENST00000517713 PBOV1Q9GZY1 135 aa23.51■■□□□ 1.35
COL13A1-210ENST00000517713 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-210ENST00000517713 HSD11B1P28845 292 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 GUCA1AP43080 201 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-210ENST00000517713 NUBP1P53384 320 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 AIMP2Q13155 320 aaKnown RBP23.5■■□□□ 1.35
COL13A1-210ENST00000517713 ELMOD2Q8IZ81 293 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 SIGLEC12Q96PQ1 595 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 KIAA1549Q9HCM3 1950 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 CCNKO75909 580 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 SLC6A1P30531 599 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 ZNF133P52736 654 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-210ENST00000517713 TAF13Q15543 124 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 SGCAQ16586 387 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 IL22RA1Q8N6P7 574 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 NKD1Q969G9 470 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 FAM173AQ9BQD7 235 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 NIPAL2Q9H841 368 aa23.5■■□□□ 1.35
COL13A1-210ENST00000517713 SLC17A2O00624 439 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 SULT1B1O43704 296 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 TTRP02766 147 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 ITGA5P08648 1049 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 ACSM4P0C7M7 580 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 STARP49675 285 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 RAB11BQ15907 218 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 GLT8D1Q68CQ7 371 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 PNPLA2Q96AD5 504 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 INTS12Q96CB8 462 aaKnown RBP23.49■■□□□ 1.35
COL13A1-210ENST00000517713 MARVELD1Q9BSK0 173 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 A0A0B4J293 547 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 RER1O15258 196 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 CDK2P24941 298 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 DDOSTP39656 456 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 SELENOPP49908 381 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 SUCLG1P53597 346 aaKnown RBP23.49■■□□□ 1.35
COL13A1-210ENST00000517713 LSM6P62312 80 aaKnown RBP23.49■■□□□ 1.35
COL13A1-210ENST00000517713 TMEM69Q5SWH9 247 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 PLPP7Q8NBV4 271 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 OR2M7Q8NG81 312 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 OR51D1Q8NGF3 324 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 UPRTQ96BW1 309 aa23.49■■□□□ 1.35
COL13A1-210ENST00000517713 DDX28Q9NUL7 540 aaKnown RBP23.49■■□□□ 1.35
COL13A1-210ENST00000517713 CDV3Q9UKY7 258 aaKnown RBP23.49■■□□□ 1.35
COL13A1-210ENST00000517713 CENPXA8MT69 81 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 POU3F2P20265 443 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-210ENST00000517713 PTH2RP49190 550 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 PSMA6P60900 246 aaKnown RBP23.48■■□□□ 1.35
COL13A1-210ENST00000517713 SIAH3Q8IW03 269 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 DEFB124Q8NES8 71 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 OR2V1Q8NHB1 315 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 ADGRG7Q96K78 797 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 ZNF416Q9BWM5 594 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 AUNIPQ9H7T9 357 aa23.48■■□□□ 1.35
COL13A1-210ENST00000517713 PNRC2Q9NPJ4 139 aaKnown RBP23.48■■□□□ 1.35
COL13A1-210ENST00000517713 FOXD3Q9UJU5 478 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-210ENST00000517713 CXCL13O43927 109 aa23.47■■□□□ 1.35
COL13A1-210ENST00000517713 LMX1BO60663 402 aa23.47■■□□□ 1.35
COL13A1-210ENST00000517713 MSR1P21757 451 aa23.47■■□□□ 1.35
COL13A1-210ENST00000517713 PLA2G7Q13093 441 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms