RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ERMAPQ96PL5 475 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-215ENST00000515516 CDRT15Q96T59 188 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 GAL3ST1Q99999 423 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 MSL2Q9HCI7 577 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 ASH2LQ9UBL3 628 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 ARL2BPQ9Y2Y0 163 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
TCOF1-215ENST00000515516 COL6A5A8TX70 2615 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 ISPDA4D126 451 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 ZSCAN5BA6NJL1 495 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 IMPA2O14732 288 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 MPZL1O95297 269 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 RENP00797 406 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 NOS3P29474 1203 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 MNAT1P51948 309 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 PSG7Q13046 419 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 RFX4Q33E94 735 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-215ENST00000515516 OR5L1Q8NGL2 311 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 OR1F12Q8NHA8 337 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 CMBLQ96DG6 245 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 DCLRE1CQ96SD1 692 aaKnown RBP11.61□□□□□ -0.55
TCOF1-215ENST00000515516 C19orf24Q9BVV8 132 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 METTL17Q9H7H0 456 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-215ENST00000515516 KLHL21Q9UJP4 597 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
TCOF1-215ENST00000515516 OR6C6A6NF89 314 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 ARPC2O15144 300 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 SURF4O15260 269 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 PPP1R3DO95685 299 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 TXNDC12O95881 172 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 PNPP00491 289 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 CD55P08174 381 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 ADH4P08319 380 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 TNFRSF1AP19438 455 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 MSX2P35548 267 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-215ENST00000515516 CDKN2AP42771 156 aaKnown RBP11.6□□□□□ -0.55
TCOF1-215ENST00000515516 RGS6P49758 472 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
TCOF1-215ENST00000515516 SPATS1Q496A3 300 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 LEG1Q6P5S2 330 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 PTCHD4Q6ZW05 846 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 GJC3Q8NFK1 279 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 GNPDA2Q8TDQ7 276 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 ST7LQ8TDW4 575 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 CDADC1Q9BWV3 514 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
TCOF1-215ENST00000515516 PURGQ9UJV8 347 aaKnown RBP11.6□□□□□ -0.55
TCOF1-215ENST00000515516 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
TCOF1-215ENST00000515516 A0A0G2JMP0 313 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 A0A0X1KG70 313 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 J3QW42 95 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 RER1O15258 196 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 PLPP2O43688 288 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 UBOX5O94941 541 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 KITLGP21583 273 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 FPR3P25089 353 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 RRM2P31350 389 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 CDK5R2Q13319 367 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 KCNMB1Q16558 191 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 SLC36A3Q495N2 470 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 CCDC92Q53HC0 331 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-215ENST00000515516 OTPQ5XKR4 325 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 DEFB107AQ8IZN7 70 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 HAVCR1Q96D42 359 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 GPA33Q99795 319 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 FUZQ9BT04 418 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 OR52D1Q9H346 318 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 ARL8BQ9NVJ2 186 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 CD300AQ9UGN4 299 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 ATPIF1Q9UII2 106 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 PCDHB10Q9UN67 800 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
TCOF1-215ENST00000515516 ARPC3O15145 178 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 IDH3BO43837 385 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 KRT36O76013 467 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 SEMG1P04279 462 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 SBK2P0C263 348 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 RAC2P15153 192 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 GYS2P54840 703 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 FXYD6P3P58550 94 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 TMEM255AQ5JRV8 349 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 DCAF12L2Q5VW00 463 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 SLC27A4Q6P1M0 643 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 ZNF771Q7L3S4 317 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-215ENST00000515516 PIGWQ7Z7B1 504 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 ZDHHC21Q8IVQ6 265 aa11.58□□□□□ -0.56
TCOF1-215ENST00000515516 LINC00471Q8N535 108 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms