RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TRIM15Q9C019 465 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 C1orf21Q9H246 121 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 MAGIXQ9H6Y5 334 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 CHODLQ9H9P2 273 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 MSL2Q9HCI7 577 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 ARMC1Q9NVT9 282 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 LHFPL6Q9Y693 200 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 CHD3Q12873 2000 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 ZSCAN5BA6NJL1 495 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 NDUFS8O00217 210 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 BHLHE40O14503 412 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 PPIHO43447 177 aaKnown RBP9.8□□□□□ -0.84
VCAN-212ENST00000515397 ABHD16AO95870 558 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 CST1P01037 141 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 TGFAP01135 160 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 HLA-DQA2P01906 255 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 GAAP10253 952 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 ZNF23P17027 643 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 PRKACGP22612 351 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 GIFP27352 417 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 ZNF81P51508 661 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 PRSS12P56730 875 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 TEKQ02763 1124 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 SCRN3Q0VDG4 424 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 PSG7Q13046 419 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 MICAQ29983 383 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 MTX3Q5HYI7 312 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 ZNF362Q5T0B9 420 aaPredicted RBP9.8□□□□□ -0.84
VCAN-212ENST00000515397 AVPI1Q5T686 147 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 SYT9Q86SS6 491 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 SPATA24Q86W54 205 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 HS3ST5Q8IZT8 346 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 IQCF1Q8N6M8 205 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 OR9Q1Q8NGQ5 310 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 OR4Q3Q8NH05 313 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 OR1F12Q8NHA8 337 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 RDH5Q92781 318 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 NIPSNAP1Q9BPW8 284 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 TSSK6Q9BXA6 273 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 MUC13Q9H3R2 512 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 REEP1Q9H902 201 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 WDR76Q9H967 626 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 ZNF275Q9NSD4 429 aaPredicted RBP9.8□□□□□ -0.84
VCAN-212ENST00000515397 SLCO1C1Q9NYB5 712 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 CDH10Q9Y6N8 788 aa9.8□□□□□ -0.84
VCAN-212ENST00000515397 TLX2O43763 284 aaPredicted RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 IGHV1-46P01743 117 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 IGHV3-13P01766 116 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 GYPBP06028 91 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 RAP2AP10114 183 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 CLUP10909 449 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 PSKH1P11801 424 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 CRABP1P29762 137 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 MMP15P51511 669 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 LSM6P62312 80 aaKnown RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 MVKQ03426 396 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 TRAP1Q12931 704 aaKnown RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 AQP6Q13520 282 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 KCNMB1Q16558 191 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 PGM2L1Q6PCE3 622 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 CFAP77Q6ZQR2 320 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 RASSF6Q6ZTQ3 369 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 USP51Q70EK9 711 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 NAA40Q86UY6 237 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 OR5AS1Q8N127 324 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 SLC37A3Q8NCC5 494 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 ZNF540Q8NDQ6 660 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 SLC26A10Q8NG04 563 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 OR52L1Q8NGH7 329 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 SNX33Q8WV41 574 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 CMBLQ96DG6 245 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 DDOQ99489 341 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 FEVQ99581 238 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 MED20Q9H944 212 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 ELOVL3Q9HB03 270 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 LPAR2Q9HBW0 351 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 MYOZ1Q9NP98 299 aaPredicted RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 TBC1D23Q9NUY8 699 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 MRPL22Q9NWU5 206 aaKnown RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 IL20Q9NYY1 176 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 PTTG3PQ9NZH4 202 aa9.79□□□□□ -0.84
VCAN-212ENST00000515397 FBXO9Q9UK97 447 aaPredicted RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 NDRG4Q9ULP0 352 aaKnown RBP9.79□□□□□ -0.84
VCAN-212ENST00000515397 IGHV3-64DA0A0J9YX35 117 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 DHRS12A0PJE2 317 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 OR6C6A6NF89 314 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 GNGT2O14610 69 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 GSC2O15499 205 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 IDH3BO43837 385 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 TIMM8AO60220 97 aaPredicted RBP9.78□□□□□ -0.84
VCAN-212ENST00000515397 LMX1BO60663 402 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 RP2O75695 350 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 POU1F1P28069 291 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 GPR6P46095 362 aaPredicted RBP9.78□□□□□ -0.84
VCAN-212ENST00000515397 GZMKP49863 264 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 ARHGDIAP52565 204 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 CRMP1Q14194 572 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 FLOT2Q14254 428 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms