RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 SLC35A2P78381 396 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 MRPS34P82930 218 aaKnown RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 ANKRD37Q7Z713 158 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 GOLM1Q8NBJ4 401 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 TSNAXQ99598 290 aaKnown RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 CATR1Q13166 79 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 OR56B1Q8NGI3 324 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 UPRTQ96BW1 309 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 ACOXLQ9NUZ1 547 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 FRG2CA6NGY1 282 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 MRPL19P49406 292 aaKnown RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 TAS2R19P59542 299 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 ARL6IP1Q15041 203 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 SYT14P1Q58G82 188 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 DNAJC5GQ8N7S2 189 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 WDSUB1Q8N9V3 476 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 UBQLN3Q9H347 655 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 INPP5EQ9NRR6 644 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 IGHV3-7P01780 117 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 DIO1P49895 249 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 FOXL2P58012 376 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 PMPCAQ10713 525 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 MEF2DQ14814 521 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 SPRED1Q7Z699 444 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 SLC38A1Q9H2H9 487 aa13.07□□□□□ -0.32
TRIO-222ENST00000515144 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
TRIO-222ENST00000515144 TCRBV3S1A0A5B6 114 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 APOA2P02652 100 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 SBK2P0C263 348 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 NLRC3Q7RTR2 1065 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 ADGRF3Q8IZF5 1079 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 ZNF583Q96ND8 569 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 LAT2Q9GZY6 243 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 AGERQ15109 404 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 IDO2Q6ZQW0 420 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 IGHV5-10-1A0A0J9YXX1 117 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 MSTNO14793 375 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 RAB13P51153 203 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 ACER2Q5QJU3 275 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 AMER3Q8N944 861 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 NRG4Q8WWG1 115 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 AVPR2P30518 371 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 ZNF121P58317 390 aaPredicted RBP13.06□□□□□ -0.32
TRIO-222ENST00000515144 RPS16P62249 146 aaKnown RBP13.06□□□□□ -0.32
TRIO-222ENST00000515144 CAMKMTQ7Z624 323 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 SLC35G3Q8N808 338 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 NT5DC2Q9H857 520 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 LHX9Q9NQ69 397 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 A6NHS1 94 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 GAPDHSO14556 408 aaPredicted RBP13.06□□□□□ -0.32
TRIO-222ENST00000515144 DVL1O14640 695 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 CLN5O75503 358 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 DVL1P1P54792 670 aaPredicted RBP13.06□□□□□ -0.32
TRIO-222ENST00000515144 DUSP8Q13202 625 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 PDCD1Q15116 288 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 ENTHD1Q8IYW4 607 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 SUN5Q8TC36 379 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 LYSMD1Q96S90 227 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 TMEM38AQ9H6F2 299 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 GPATCH2Q9NW75 528 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 CTSVO60911 334 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 TSPAN15O95858 294 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 RAB35Q15286 201 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 CEACAM16Q2WEN9 425 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 PLXDC2Q6UX71 529 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 CMIPQ8IY22 773 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 C12orf45Q8N5I9 185 aaPredicted RBP13.06□□□□□ -0.32
TRIO-222ENST00000515144 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIO-222ENST00000515144 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
TRIO-222ENST00000515144 IMPA2O14732 288 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 FPR3P25089 353 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 SDHAP31040 664 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 NXNL2Q5VZ03 156 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 GALNT16Q8N428 558 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 HEYLQ9NQ87 328 aaPredicted RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 FANCMQ8IYD8 2048 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 H7C1Q1 480 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 ALPLP05186 524 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 TMIGD3P0DMS9 266 aaPredicted RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 NPY4RP50391 375 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 DNAJC22Q8N4W6 341 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms