RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 THEM6Q8WUY1 208 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 TRUB1Q8WWH5 349 aaKnown RBP9.81□□□□□ -0.84
HTT-213ENST00000513806 RNFT2Q96EX2 444 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 CNN2Q99439 309 aaKnown RBP9.81□□□□□ -0.84
HTT-213ENST00000513806 APOL4Q9BPW4 351 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 USB1Q9BQ65 265 aaKnown RBP9.81□□□□□ -0.84
HTT-213ENST00000513806 ABHD6Q9BV23 337 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 VCX3BQ9H321 246 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 POFUT1Q9H488 388 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 CENPMQ9NSP4 180 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 CLN6Q9NWW5 311 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 FZR1Q9UM11 496 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 ATP23Q9Y6H3 246 aa9.81□□□□□ -0.84
HTT-213ENST00000513806 IQCMA0A1B0GVH7 501 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 C5orf49A4QMS7 147 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SLC22A31A6NKX4 558 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 GPRIN2O60269 458 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 CTAG2O75638 210 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SERPINA5P05154 406 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SBK2P0C263 348 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
HTT-213ENST00000513806 APLNRP35414 380 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 PEX19P40855 299 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 WNT5AP41221 380 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 PRSS12P56730 875 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 PCBD1P61457 104 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 PLP2Q04941 152 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SCRN3Q0VDG4 424 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 CDK5R2Q13319 367 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 GGTLC2Q14390 218 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 RAB35Q15286 201 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 RSPO1Q2MKA7 263 aaPredicted RBP9.8□□□□□ -0.84
HTT-213ENST00000513806 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SLC22A25Q6T423 547 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 TMEM108Q6UXF1 575 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 ZNF704Q6ZNC4 412 aaPredicted RBP9.8□□□□□ -0.84
HTT-213ENST00000513806 PLEKHG7Q6ZR37 379 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SLC16A9Q7RTY1 509 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 C8orf59Q8N0T1 100 aaPredicted RBP9.8□□□□□ -0.84
HTT-213ENST00000513806 GJC3Q8NFK1 279 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 OR1F12Q8NHA8 337 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 LGALS12Q96DT0 336 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 POM121L2Q96KW2 1035 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 CNBD2Q96M20 576 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 LIME1Q9H400 295 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 ESRP2Q9H6T0 727 aaKnown RBP9.8□□□□□ -0.84
HTT-213ENST00000513806 UBTD1Q9HAC8 227 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 NGBQ9NPG2 151 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 FBXL3Q9UKT7 428 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 RNF115Q9Y4L5 304 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 N6AMT1Q9Y5N5 214 aa9.8□□□□□ -0.84
HTT-213ENST00000513806 TACC2O95359 2948 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 FAM221AA4D161 298 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 OR6C6A6NF89 314 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 E7EQL1 145 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 F5H5K5 113 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 H0YJX3 145 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 XPNPEP2O43895 674 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SLC2A1P11166 492 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 ZNF35P13682 527 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 PTAFRP25105 342 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 MTNR1AP48039 350 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 GDI2P50395 445 aaKnown RBP9.79□□□□□ -0.84
HTT-213ENST00000513806 PRKXP51817 358 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 GALK2Q01415 458 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 MVKQ03426 396 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 PCK2Q16822 640 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 TEX30Q5JUR7 227 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SLC25A30Q5SVS4 291 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 LRRN1Q6UXK5 716 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 THAP5Q7Z6K1 395 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SYT9Q86SS6 491 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 ZNF101Q8IZC7 436 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SETD9Q8NE22 299 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 OR10H4Q8NGA5 316 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 OTOSQ8NHW6 89 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SGCDQ92629 289 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 AKAP1Q92667 903 aaKnown RBP eCLIP9.79□□□□□ -0.84
HTT-213ENST00000513806 KCNS3Q9BQ31 491 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 CLEC4MQ9H2X3 399 aaPredicted RBP9.79□□□□□ -0.84
HTT-213ENST00000513806 C1orf198Q9H425 327 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 CDH20Q9HBT6 801 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 SLCO1C1Q9NYB5 712 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 WARS2Q9UGM6 360 aaKnown RBP9.79□□□□□ -0.84
HTT-213ENST00000513806 LAMP5Q9UJQ1 280 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 POU2F3Q9UKI9 436 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 MYRFQ9Y2G1 1151 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 GRIP1Q9Y3R0 1128 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 ARFGEF3Q5TH69 2177 aa9.79□□□□□ -0.84
HTT-213ENST00000513806 A0A1W2PQL4 384 aaPredicted RBP9.78□□□□□ -0.84
HTT-213ENST00000513806 NGFP01138 241 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 CRYAAP02489 173 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 LYNP07948 512 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 ALOX5APP20292 161 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 MYF6P23409 242 aa9.78□□□□□ -0.84
HTT-213ENST00000513806 THBS4P35443 961 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms