RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NEURL3Q96EH8 262 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 C16orf58Q96GQ5 468 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF75AQ96N20 296 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF385AQ96PM9 386 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 OR4F4Q96R69 305 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 BCL2L14Q9BZR8 327 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TRIM15Q9C019 465 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CTDSP1Q9GZU7 261 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 C1orf198Q9H425 327 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 NANOGQ9H9S0 305 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SPAG4Q9NPE6 437 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 PNRC2Q9NPJ4 139 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 EQTNQ9NQ60 294 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 EXOSC3Q9NQT5 275 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CTPS2Q9NRF8 586 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SIRT3Q9NTG7 399 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 UBAP1Q9NZ09 502 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MYEF2Q9P2K5 600 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TBK1Q9UHD2 729 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GUCA1BQ9UMX6 200 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 RASD1Q9Y272 281 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC35A3Q9Y2D2 325 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 USH1CQ9Y6N9 552 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 U3KQK5 164 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 HERC2O95714 4834 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TRBV5-7A0A0A0MS05 114 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV2-70DA0A0C4DH43 119 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 LOC102725191A0A1B0GVB3 256 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PLSCR5A0PG75 271 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ISPDA4D126 451 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 LIPT2A6NK58 231 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM90A7PA6NKC0 464 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM159BA6NKW6 160 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM90A22PA8MWA6 464 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM90A12PA8MX19 464 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF99A8MXY4 864 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM90A23PA8MXZ1 464 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 F5H0A9 414 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 IFNL4K9M1U5 179 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 P2RY10O00398 339 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAAHO00519 579 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TM9SF1O15321 606 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SMIM24O75264 130 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ENTPD5O75356 428 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 STX11O75558 287 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 UPK3AO75631 287 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 UBL3O95164 117 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SNAP29O95721 258 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CLPTM1O96005 669 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 AK1P00568 194 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CSTAP01040 98 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PTHP01270 115 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV2-70P01814 119 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CD55P08174 381 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 RPS17P08708 135 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 SBK2P0C263 348 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 OR12D1P0DN82 309 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 BCKDHAP12694 445 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 HSD17B3P37058 310 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CAPZA2P47755 286 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 RASSF2P50749 326 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CCR4P51679 360 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 POLR2HP52434 150 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 UCP2P55851 309 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TUBA1BP68363 451 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PDIA2Q13087 525 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 PTGR1Q14914 329 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 RASA2Q15283 850 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 DCST2Q5T1A1 773 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CCNJQ5T5M9 372 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC35E4Q6ICL7 350 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 NIPAL3Q6P499 406 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 UNQ6126/PRO20091Q6UXV3 157 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 C3orf62Q6ZUJ4 267 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TUBA1AQ71U36 451 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 LINGO2Q7L985 606 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 DPPA2Q7Z7J5 298 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 GPAT4Q86UL3 456 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 EPHX4Q8IUS5 362 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 LRRC8AQ8IWT6 810 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CNPY4Q8N129 248 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR137CQ8N3F9 429 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TMCO5AQ8N6Q1 288 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM217Q8N7C4 229 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF614Q8N883 585 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 NOA1Q8NC60 698 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 PAPD5Q8NDF8 572 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 SETD9Q8NE22 299 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM71CQ8NEG0 241 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 OR1J2Q8NGS2 313 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PSMA8Q8TAA3 256 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 MUC7Q8TAX7 377 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PYROXD1Q8WU10 500 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM170AQ8WVE7 144 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ST8SIA4Q92187 359 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 HDAC2Q92769 488 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 OTULINQ96BN8 352 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 MOAP1Q96BY2 351 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PLEKHA8Q96JA3 519 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms