RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 IL17RDQ8NFM7 739 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 ZNF519Q8TB69 540 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 IP6K3Q96PC2 410 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 OR14A2Q96R54 314 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 OR8B4Q96RC9 309 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 SMAD5Q99717 465 aaKnown RBP8.48□□□□□ -1.05
MSH3-203ENST00000512531 NAA11Q9BSU3 229 aaPredicted RBP8.48□□□□□ -1.05
MSH3-203ENST00000512531 OR2B2Q9GZK3 357 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 ZNF700Q9H0M5 742 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 C11orf54Q9H0W9 315 aaPredicted RBP8.48□□□□□ -1.05
MSH3-203ENST00000512531 NIPAL2Q9H841 368 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 NOX4Q9NPH5 578 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 FANCFQ9NPI8 374 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 DIABLOQ9NR28 239 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 ZNF275Q9NSD4 429 aaPredicted RBP8.48□□□□□ -1.05
MSH3-203ENST00000512531 TAS2R5Q9NYW4 299 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 DHDHQ9UQ10 334 aa8.48□□□□□ -1.05
MSH3-203ENST00000512531 SIRT4Q9Y6E7 314 aaPredicted RBP8.48□□□□□ -1.05
MSH3-203ENST00000512531 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 NSG1A0A0A6YYJ2 146 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 IGHV3-20A0A0C4DH32 117 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 SLC22A23A1A5C7 686 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 IFITM5A6NNB3 132 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 ZNF726A6NNF4 738 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 ETV2O00321 342 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 TFECO14948 347 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 GSTZ1O43708 216 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 EIF1BO60739 113 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 ALX3O95076 343 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 VAMP5O95183 116 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 SCGB1D2O95969 90 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 IGHG1P01857 330 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 UBCP0CG48 685 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 OR8G3PP0DMU2 310 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 MST1P26927 711 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 DDOSTP39656 456 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 PSMB10P40306 273 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 SSR4P51571 173 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 RRADP55042 308 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 CLRN1P58418 232 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 CSNK2A1P68400 391 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 MRPS15P82914 257 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 HSF1Q00613 529 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 ROM1Q03395 351 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 EIF2B1Q14232 305 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 SLC17A1Q14916 467 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 GXYLT1Q4G148 440 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TEX30Q5JUR7 227 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TMEM244Q5VVB8 128 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 TIGD3Q6B0B8 471 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 NDUFAF7Q7L592 441 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 DPY19L4Q7Z388 723 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TMEM156Q8N614 296 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 Q8NA96 180 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 OR2AJ1Q8NGZ0 328 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 OR2G2Q8NGZ5 317 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 ASB10Q8WXI3 467 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 DERL3Q96Q80 235 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TIMP4Q99727 224 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 PTDSS2Q9BVG9 487 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 SLC22A11Q9NSA0 550 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TAS2R8Q9NYW2 309 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 EMC3Q9P0I2 261 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 MALT1Q9UDY8 824 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 COPS3Q9UNS2 423 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 FOXJ3Q9UPW0 622 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 AK6Q9Y3D8 172 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 PTRH2Q9Y3E5 179 aaKnown RBP8.47□□□□□ -1.05
MSH3-203ENST00000512531 NUBP2Q9Y5Y2 271 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 CACNG2Q9Y698 323 aa8.47□□□□□ -1.05
MSH3-203ENST00000512531 TRBV5-5A0A0J9YX44 114 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 TVP23AA6NH52 213 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ARGFXA6NJG6 315 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 FAM171A2A8MVW0 826 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 PRKNO60260 465 aaPredicted RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 OR2J2O76002 312 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 SCGNO76038 276 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ZFPL1O95159 310 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 PLGP00747 810 aaPredicted RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 YES1P07947 543 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ERCC1P07992 297 aaPredicted RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 ZNF43P17038 809 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 DCTDP32321 178 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 DNASE1L1P49184 302 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 CCL11P51671 97 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 HCCSP53701 268 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 RAG2P55895 527 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 CLDN20P56880 219 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 POU3F1Q03052 451 aaPredicted RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 TOMM20Q15388 145 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 MEP1BQ16820 701 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 CEP78Q5JTW2 689 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms