RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SLCO1C1Q9NYB5 712 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 GRIP1Q9Y3R0 1128 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 ZSCAN5BA6NJL1 495 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
DDX41-213ENST00000512027 BHLHE40O14503 412 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 GYG2O15488 501 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 TFP02787 698 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 RAP2AP10114 183 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 COX5BP10606 129 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 PYCR1P32322 319 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 RBMXP38159 391 aaKnown RBP14.06□□□□□ -0.16
DDX41-213ENST00000512027 LSM6P62312 80 aaKnown RBP14.06□□□□□ -0.16
DDX41-213ENST00000512027 CCNIQ14094 377 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 KCNMB1Q16558 191 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 MICAQ29983 383 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 CYB5R2Q6BCY4 276 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 LYPD4Q6UWN0 246 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 RASSF6Q6ZTQ3 369 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 TMEM179BQ7Z7N9 219 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 NPEPL1Q8NDH3 523 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 SLC26A10Q8NG04 563 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 OR52L1Q8NGH7 329 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 ZNRF4Q8WWF5 429 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 RDH5Q92781 318 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 CHID1Q9BWS9 393 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 CHODLQ9H9P2 273 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 ZNF275Q9NSD4 429 aaPredicted RBP14.06□□□□□ -0.16
DDX41-213ENST00000512027 TBC1D23Q9NUY8 699 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 ARMC1Q9NVT9 282 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 STARD10Q9Y365 291 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 CACNG2Q9Y698 323 aa14.06□□□□□ -0.16
DDX41-213ENST00000512027 TANC2Q9HCD6 1990 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR6C6A6NF89 314 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 WNT9BO14905 357 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 SPRY3O43610 288 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 ICMTO60725 284 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 RP2O75695 350 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 CST1P01037 141 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 RPS27P42677 84 aaKnown RBP14.05□□□□□ -0.16
DDX41-213ENST00000512027 ZNF81P51508 661 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 MMP15P51511 669 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 TRAP1Q12931 704 aaKnown RBP14.05□□□□□ -0.16
DDX41-213ENST00000512027 SPRNQ5BIV9 151 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 MBNL2Q5VZF2 373 aaKnown RBP14.05□□□□□ -0.16
DDX41-213ENST00000512027 PGM2L1Q6PCE3 622 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 CFAP77Q6ZQR2 320 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 IL17RELQ6ZVW7 336 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 ZBTB46Q86UZ6 589 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 LINC00471Q8N535 108 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 ZNF540Q8NDQ6 660 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR10G2Q8NGC3 310 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR51L1Q8NGJ5 315 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR9Q1Q8NGQ5 310 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR4Q3Q8NH05 313 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 OR1F12Q8NHA8 337 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 NIPSNAP1Q9BPW8 284 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 WACQ9BTA9 647 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 TSSK6Q9BXA6 273 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 ELOVL3Q9HB03 270 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 MSL2Q9HCI7 577 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 IL20Q9NYY1 176 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 GPR160Q9UJ42 338 aa14.05□□□□□ -0.16
DDX41-213ENST00000512027 LOC100289279A0A1B0GTE1 492 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 DHRS12A0PJE2 317 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 TVP23AA6NH52 213 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 TPD52L2O43399 206 aaKnown RBP14.04□□□□□ -0.16
DDX41-213ENST00000512027 IDH3BO43837 385 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 IGHV1-46P01743 117 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 HLA-DQA2P01906 255 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 TACSTD2P09758 323 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 PSKH1P11801 424 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 ACHEP22303 614 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 GPR6P46095 362 aaPredicted RBP14.04□□□□□ -0.16
DDX41-213ENST00000512027 GZMKP49863 264 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 ARHGDIAP52565 204 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 HIST1H3AP68431 136 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 TEKQ02763 1124 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 FLOT2Q14254 428 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 DNAL1Q4LDG9 190 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 ZNF362Q5T0B9 420 aaPredicted RBP14.04□□□□□ -0.16
DDX41-213ENST00000512027 HIST2H3PS2Q5TEC6 136 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 HIST2H3AQ71DI3 136 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 SPATA24Q86W54 205 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 HS3ST5Q8IZT8 346 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 SLC37A3Q8NCC5 494 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 DDOQ99489 341 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 MRPL22Q9NWU5 206 aaKnown RBP14.04□□□□□ -0.16
DDX41-213ENST00000512027 TREM2Q9NZC2 230 aa14.04□□□□□ -0.16
DDX41-213ENST00000512027 AQP12BA6NM10 295 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 PPIHO43447 177 aaKnown RBP14.03□□□□□ -0.16
DDX41-213ENST00000512027 GYPBP06028 91 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 IGFBP5P24593 272 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 CHN2P52757 468 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 COX10Q12887 443 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 PSG7Q13046 419 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 CRMP1Q14194 572 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 AVPI1Q5T686 147 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 SLC18B1Q6NT16 456 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 RPL13AP3Q6NVV1 102 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms