RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 A0A1W2PPW3 197 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 FAM171A2A8MVW0 826 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 ZNF587BE7ETH6 402 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 GPX5O75715 221 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 FARS2O95363 451 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 RAF1P04049 648 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 AGTR1P30556 359 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 SOX6P35712 828 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 CD79BP40259 229 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 MTNR1BP49286 362 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 GDI2P50395 445 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 PMP22Q01453 160 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 SRYQ05066 204 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 DYNC1I2Q13409 638 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 LSAMPQ13449 338 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 ALKBH1Q13686 389 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 SPCS2Q15005 226 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 MEP1BQ16820 701 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TP53I3Q53FA7 332 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 LIPNQ5VXI9 398 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 NSUN5P2Q63ZY6 315 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TPRA1Q86W33 373 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 CROCCP3Q8IVE0 287 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 WDFY1Q8IWB7 410 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 CCDC36Q8IYA8 594 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 RFLNBQ8N5W9 214 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 CCDC54Q8NEL0 328 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 GJC3Q8NFK1 279 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 THEM6Q8WUY1 208 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 NSMAFQ92636 917 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 RPL3LQ92901 407 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 APH1AQ96BI3 265 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 CHCHD6Q9BRQ6 235 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 COMMD4Q9H0A8 199 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 HDHD2Q9H0R4 259 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 OR51E2Q9H255 320 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TXNL4BQ9NX01 149 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 IKZF2Q9UKS7 526 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 POLR1DQ9Y2S0 133 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 KLHDC2Q9Y2U9 406 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 EMC9Q9Y3B6 208 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 LHFPL6Q9Y693 200 aa8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TNRC6AQ8NDV7 1962 aaKnown RBP8.01□□□□□ -1.13
NR1I3-230ENST00000511944 TRAV1-2A0A0B4J238 106 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 MBD3L4A6NDZ8 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 MBD3L3A6NE82 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 MBD3L5A6NJ08 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 ZNF879B4DU55 563 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 GABRPO00591 440 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 SRSF10O75494 262 aaKnown RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 CLPXO76031 633 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ISG15P05161 165 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 UBCP0CG48 685 aaKnown RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 FOSL1P15407 271 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 PAX7P23759 505 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 EDNRAP25101 427 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 OTX1P32242 354 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 OR3A2P47893 321 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 VBP1P61758 197 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 NCS1P62166 190 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 SCRN3Q0VDG4 424 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ENDOGQ14249 297 aaKnown RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 MSMPQ1L6U9 139 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 PLEKHN1Q494U1 663 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 ACSF3Q4G176 576 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 CARD17Q5XLA6 110 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ARL9Q6T311 187 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ZNF704Q6ZNC4 412 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 P4HA3Q7Z4N8 544 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 LSRQ86X29 649 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 HIST2H2ABQ8IUE6 130 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 OR6K3Q8NGY3 331 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 OR2G2Q8NGZ5 317 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 OR5AK2Q8NH90 309 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 MBD3L2Q8NHZ7 208 aaPredicted RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 ZCCHC14Q8WYQ9 949 aaKnown RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 GHSRQ92847 366 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 SLAMF6Q96DU3 332 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 C4orf45Q96LM5 186 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 FOXB1Q99853 325 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 MMP27Q9H306 513 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 SP140LQ9H930 580 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 SEC61A2Q9H9S3 476 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ELOVL3Q9HB03 270 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 CRLF2Q9HC73 371 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 GPR35Q9HC97 309 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 MOV10Q9HCE1 1003 aaKnown RBP8□□□□□ -1.13
NR1I3-230ENST00000511944 SLCO1C1Q9NYB5 712 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 ZNF281Q9Y2X9 895 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 LRP12Q9Y561 859 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 R4GMQ9 66 aa8□□□□□ -1.13
NR1I3-230ENST00000511944 FREM2Q5SZK8 3169 aa7.99□□□□□ -1.13
NR1I3-230ENST00000511944 A0A075B6Q4 140 aa7.99□□□□□ -1.13
NR1I3-230ENST00000511944 LOC100506127A0A0U1RQW1 187 aa7.99□□□□□ -1.13
NR1I3-230ENST00000511944 A0A1B0GTH9 108 aa7.99□□□□□ -1.13
NR1I3-230ENST00000511944 OR4C45A6NMZ5 311 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms