RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 WNT2BQ93097 391 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ABHD17AQ96GS6 310 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 GPR137Q96N19 417 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 DERL3Q96Q80 235 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ALKBH3Q96Q83 286 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 C6orf62Q9GZU0 229 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 PLGRKTQ9HBL7 147 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 PNRC2Q9NPJ4 139 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 AKIP1Q9NQ31 210 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 OR52A1Q9UKL2 312 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 LHX6Q9UPM6 363 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 PDGFAP04085 211 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 CD2P06729 351 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 OCM2P0CE71 109 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 GABRA1P14867 456 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 AGTR1P30556 359 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 KIR3DL2P43630 455 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 PSMD7P51665 324 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF45Q02386 682 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 TAF13Q15543 124 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 CEACAM16Q2WEN9 425 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 TSPO2Q5TGU0 170 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 MZT2AQ6P582 158 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 FAM180AQ6UWF9 173 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 CCDC54Q8NEL0 328 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 OR14A2Q96R54 314 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 KCNJ15Q99712 375 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 ATF6BQ99941 703 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 MRI1Q9BV20 369 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 BARHL1Q9BZE3 327 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 FAM206AQ9NX38 181 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
SCLT1-209ENST00000511426 HHLA2Q9UM44 414 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
SCLT1-209ENST00000511426 FREM2Q5SZK8 3169 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 PNPP00491 289 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 HOXD4P09016 255 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 RAB3BP20337 219 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 OTX1P32242 354 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 BMXP51813 675 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 MXD1Q05195 221 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 RAB35Q15286 201 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 C3AR1Q16581 482 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 ELFN2Q5R3F8 820 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 BCL2L15Q5TBC7 163 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF100Q8IYN0 542 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 SLC22A24Q8N4F4 322 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 RGP1Q92546 391 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF775Q96BV0 537 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 TPK1Q9H3S4 243 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 ZCCHC4Q9H5U6 513 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 SP140LQ9H930 580 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 G6PC2Q9NQR9 355 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 UPB1Q9UBR1 384 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 EMC9Q9Y3B6 208 aa13.38□□□□□ -0.27
SCLT1-209ENST00000511426 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
SCLT1-209ENST00000511426 TRBV5-7A0A0A0MS05 114 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 RER1O15258 196 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 WDR1O75083 606 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 WNT11O96014 354 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 ZNF12P17014 697 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SRMP19623 302 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 CD40LGP29965 261 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 OR3A2P47893 321 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 INSL4Q14641 139 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 ELMOD2Q8IZ81 293 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SPTSSAQ969W0 71 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SLC7A10Q9NS82 523 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 ADAM30Q9UKF2 790 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 TIMM10BQ9Y5J6 103 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 MED12Q93074 2177 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 A0A1B0GTH9 108 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 NOTOA8MTQ0 251 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 TGM6O95932 706 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 CRHP06850 196 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-209ENST00000511426 GUSBP1Q15486 140 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 OTPQ5XKR4 325 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 NSUN5P2Q63ZY6 315 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 OR13C5Q8NGS8 318 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 CEP19Q96LK0 163 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 ZFP3Q96NJ6 502 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 TCF7L1Q9HCS4 588 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 NOX4Q9NPH5 578 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 PLEK2Q9NYT0 353 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 FBXL3Q9UKT7 428 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
SCLT1-209ENST00000511426 SGCEO43556 437 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms