RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 VANGL1Q8TAA9 524 aaPredicted RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 FBXO30Q8TB52 745 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 POP5Q969H6 163 aaKnown RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 ANP32EQ9BTT0 268 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 TSGA10Q9BZW7 698 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 PPIL3Q9H2H8 161 aaKnown RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 COQ10BQ9H8M1 238 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 NHEJ1Q9H9Q4 299 aaPredicted RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 MMP26Q9NRE1 261 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 C20orf96Q9NUD7 363 aaPredicted RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 MED17Q9NVC6 651 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 ANO10Q9NW15 660 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 ABCG2Q9UNQ0 655 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 OARD1Q9Y530 152 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 MAGEB16A2A368 324 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 NCF1BA6NI72 391 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 NCF1CA8MVU1 366 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 H0YL77 283 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 ERAL1O75616 437 aaKnown RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 LINGO3P0C6S8 592 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 NCF1P14598 390 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 CSNK2A2P19784 350 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 ME2P23368 584 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 CETN2P41208 172 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 RFX3P48380 749 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 PRPS1P60891 318 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 LCN2P80188 198 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 MRPS22P82650 360 aaKnown RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 DDX39BQ13838 428 aaKnown RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 PHLDA2Q53GA4 152 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 ARMCX4Q5H9R4 360 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 SLC48A1Q6P1K1 146 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 SLC25A47Q6Q0C1 308 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 CPLX4Q7Z7G2 160 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 TMEM139Q8IV31 216 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 CKAP2Q8WWK9 683 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 CNRIP1Q96F85 164 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 ZNF681Q96N22 645 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 KATNB1Q9BVA0 655 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 CHIAQ9BZP6 476 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 ZNF442Q9H7R0 627 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 DYNLRB1Q9NP97 96 aa4.89□□□□□ -1.63
USP53-206ENST00000510737 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
USP53-206ENST00000510737 PLXNB1O43157 2135 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 WI2-2373I1.2A0A1W2PRP0 233 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TRAPPC2LH3BP13 241 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 RSL1D1O76021 490 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 TPPPO94811 219 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 OR2C1O95371 312 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 IGHV2-5P01817 119 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 PTMAP06454 111 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 CCDC175P0C221 793 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 CD1DP15813 335 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 CDH2P19022 906 aaPredicted RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 PRKACGP22612 351 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TIA1P31483 386 aaKnown RBP eCLIP4.88□□□□□ -1.63
USP53-206ENST00000510737 MAGEA1P43355 309 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 ATP4BP51164 291 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 BASP1P80723 227 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 NAAAQ02083 359 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 SNX1Q13596 522 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TGFBIQ15582 683 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TRADDQ15628 312 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TSNQ15631 228 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 PDK4Q16654 411 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 DEFB112Q30KQ8 113 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 HIKESHIQ53FT3 197 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 SASS6Q6UVJ0 657 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 C17orf78Q8N4C9 275 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 NUP37Q8NFH4 326 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 ANKRD49Q8WVL7 239 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 C1orf54Q8WWF1 131 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 UBE2E3Q969T4 207 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 APH1AQ96BI3 265 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 CCDC42Q96M95 316 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 SLC38A2Q96QD8 506 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 TBX15Q96SF7 602 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 SLC30A2Q9BRI3 323 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 SRSF8Q9BRL6 282 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 MAN2C1Q9NTJ4 1040 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 OR10H1Q9Y4A9 318 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 AUP1Q9Y679 476 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 PLECQ15149 4684 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 HEATR1Q9H583 2144 aaKnown RBP4.88□□□□□ -1.63
USP53-206ENST00000510737 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
USP53-206ENST00000510737 PPIAL4EA0A075B759 164 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 PPIAL4CA0A0B4J2A2 164 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 RBMY1BA6NDE4 496 aaKnown RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 RBMY1EA6NEQ0 496 aaKnown RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 ZNF716A6NP11 495 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 TRIM49D1C9J1S8 452 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 PPIAL4DF5H284 164 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 FOXE1O00358 373 aaPredicted RBP4.87□□□□□ -1.63
USP53-206ENST00000510737 ERLIN1O75477 346 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 STK16O75716 305 aa4.87□□□□□ -1.63
USP53-206ENST00000510737 BCAS2O75934 225 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms