RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HFEQ30201 348 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 GLCCI1Q86VQ1 547 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 PHC2Q8IXK0 858 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 SLC7A6Q92536 515 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 POFUT1Q9H488 388 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 LPAR2Q9HBW0 351 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 KLHL21Q9UJP4 597 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 POLR1DQ9Y2S0 133 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 GRIP1Q9Y3R0 1128 aa19.52■□□□□ 0.72
SNF8-209ENST00000510558 OR6C6A6NF89 314 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 ARPC3O15145 178 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 GPANK1O95872 356 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 PCMT1P22061 227 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 GSSP48637 474 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 CENPAP49450 140 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 CCDC92Q53HC0 331 aaPredicted RBP19.51■□□□□ 0.71
SNF8-209ENST00000510558 ZMAT1Q5H9K5 638 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 MTX3Q5HYI7 312 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 LEG1Q6P5S2 330 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 CYP2R1Q6VVX0 501 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 JAZF1Q86VZ6 243 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 FITM2Q8N6M3 262 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 OR1F12Q8NHA8 337 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 SAMD8Q96LT4 415 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 CCT8L2Q96SF2 557 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 IFT27Q9BW83 186 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 EGLN1Q9GZT9 426 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 MSL2Q9HCI7 577 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 ACTR3BQ9P1U1 418 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 ZDHHC8Q9ULC8 765 aa19.51■□□□□ 0.71
SNF8-209ENST00000510558 IGLV1-36A0A0B4J1U3 117 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 RER1O15258 196 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 RENP00797 406 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 MSMBP08118 114 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 HIST1H1CP16403 213 aaKnown RBP19.5■□□□□ 0.71
SNF8-209ENST00000510558 ATP6V1B2P21281 511 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 TUBG1P23258 451 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 C1orf94Q6P1W5 598 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 PGBD2Q6P3X8 592 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 PGM2L1Q6PCE3 622 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 RINLQ6ZS11 566 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.5■□□□□ 0.71
SNF8-209ENST00000510558 OR4K13Q8NH42 304 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 GNPDA2Q8TDQ7 276 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 TMEM186Q96B77 213 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 DIRC2Q96SL1 478 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 NMNAT3Q96T66 252 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 TUBG2Q9NRH3 451 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 ATPIF1Q9UII2 106 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 PURGQ9UJV8 347 aaKnown RBP19.5■□□□□ 0.71
SNF8-209ENST00000510558 B9D1Q9UPM9 204 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 STARD10Q9Y365 291 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 WIPI2Q9Y4P8 454 aa19.5■□□□□ 0.71
SNF8-209ENST00000510558 B2RBV5 119 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 CD55P08174 381 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 SRP14P37108 136 aaKnown RBP19.49■□□□□ 0.71
SNF8-209ENST00000510558 TSPAN31Q12999 210 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 MEP1BQ16820 701 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 ZNF620Q6ZNG0 422 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 OR6V1Q8N148 313 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 OR51F2Q8NH61 342 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 CCL17Q92583 94 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 TIMD4Q96H15 378 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 COG8Q96MW5 612 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 ZNF665Q9H7R5 613 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 SRA1Q9HD15 236 aaKnown RBP19.49■□□□□ 0.71
SNF8-209ENST00000510558 HIF1ANQ9NWT6 349 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 LYVE1Q9Y5Y7 322 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 LHFPL6Q9Y693 200 aa19.49■□□□□ 0.71
SNF8-209ENST00000510558 KRT36O76013 467 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 UBOX5O94941 541 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 DBHP09172 617 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 KITLGP21583 273 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 NOS3P29474 1203 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 DBPQ10586 325 aaPredicted RBP19.48■□□□□ 0.71
SNF8-209ENST00000510558 CDK5R2Q13319 367 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 SPRNQ5BIV9 151 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 GJC3Q8NFK1 279 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 RAB1CQ92928 201 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 CMBLQ96DG6 245 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 NSL1Q96IY1 281 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 DCLRE1CQ96SD1 692 aaKnown RBP19.48■□□□□ 0.71
SNF8-209ENST00000510558 RPRD1BQ9NQG5 326 aaKnown RBP19.48■□□□□ 0.71
SNF8-209ENST00000510558 DYSFO75923 2080 aa19.48■□□□□ 0.71
SNF8-209ENST00000510558 IDH3BO43837 385 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 HMGA2P52926 109 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 HIST1H3AP68431 136 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 TNFAIP6P98066 277 aaPredicted RBP19.47■□□□□ 0.71
SNF8-209ENST00000510558 KRTAP24-1Q3LI83 254 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 HIST2H3PS2Q5TEC6 136 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 CORO6Q6QEF8 472 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 HIST2H3AQ71DI3 136 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 ARHGAP24Q8N264 748 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 SDR9C7Q8NEX9 313 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 SLC26A10Q8NG04 563 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 OR9Q2Q8NGE9 314 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 RAB39BQ96DA2 213 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 COQ7Q99807 217 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 HDHD2Q9H0R4 259 aa19.47■□□□□ 0.71
SNF8-209ENST00000510558 TCRBV5S2A0A599 114 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms