RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FXYD6P3P58550 94 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 SELENOWP63302 87 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 RELBQ01201 579 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 KLF10Q13118 480 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 CYLC2Q14093 348 aaPredicted RBP13.3□□□□□ -0.28
RAB40C-202ENST00000509637 LRRC23Q53EV4 343 aaPredicted RBP13.3□□□□□ -0.28
RAB40C-202ENST00000509637 OR2T2Q6IF00 324 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 C9orf139Q6ZV77 190 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 C1orf174Q8IYL3 243 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 OR10AD1Q8NGE0 317 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 UPRTQ96BW1 309 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 TPD52L3Q96J77 140 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 ECSITQ9BQ95 431 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 TMEM246Q9BRR3 403 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 INTS9Q9NV88 658 aaKnown RBP13.3□□□□□ -0.28
RAB40C-202ENST00000509637 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 IL19Q9UHD0 177 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 PRKDCP78527 4128 aaKnown RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 C12orf71A8MTZ7 269 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 CLDN34H7C241 214 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 DCTN6O00399 190 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 RER1O15258 196 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 SGCEO43556 437 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PTP4A3O75365 173 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 MDH2P40926 338 aaKnown RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 ARHGDIAP52565 204 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PCBD1P61457 104 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 ST3GAL3Q11203 375 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 ZNF841Q6ZN19 808 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PTCHD4Q6ZW05 846 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PARP8Q8N3A8 854 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 C19orf18Q8NEA5 215 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 OR52E2Q8NGJ4 325 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PTP4A1Q93096 173 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 RASD2Q96D21 266 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 MEGF10Q96KG7 1140 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 TMEM120AQ9BXJ8 343 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
RAB40C-202ENST00000509637 PDP1Q9P0J1 537 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 NDRG4Q9ULP0 352 aaKnown RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-202ENST00000509637 IGHV2-70DA0A0C4DH43 119 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 LOC100653049A0A140TA62 436 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 A6NIZ1 184 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 EFCAB9A8MZ26 197 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 FAM220BPB1ANY3 271 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 MRASO14807 208 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 FCN3O75636 299 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 KRT34O76011 436 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 RAP1BP61224 184 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 RAP1AP62834 184 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 MEP1BQ16820 701 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 METTL21CQ5VZV1 264 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 OAFQ86UD1 273 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 KLBQ86Z14 1044 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 OFCC1Q8IZS5 231 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 DYDC1Q8WWB3 177 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 TSSK2Q96PF2 358 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 GPA33Q99795 319 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 MS4A7Q9GZW8 240 aaPredicted RBP13.28□□□□□ -0.28
RAB40C-202ENST00000509637 PRDM13Q9H4Q3 707 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 WDR76Q9H967 626 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 SAR1AQ9NR31 198 aa13.28□□□□□ -0.28
RAB40C-202ENST00000509637 TRAV40A0A0B4J280 105 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 TEX13CA0A0J9YWL9 993 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 PRSS37A4D1T9 235 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 F5H5P2 479 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 CD14P08571 375 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 RAC2P15153 192 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 TNFRSF1AP19438 455 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 GSTM3P21266 225 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 SLC9A3P48764 834 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 HIST1H3AP68431 136 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 IL13RA1P78552 427 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ESCO2Q56NI9 601 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ZMAT1Q5H9K5 638 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 HIST2H3PS2Q5TEC6 136 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 FAM205BPQ63HN1 556 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 C16orf87Q6PH81 154 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 UNQ6126/PRO20091Q6UXV3 157 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 FBXW12Q6X9E4 464 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 TMPRSS11FQ6ZWK6 438 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 HIST2H3AQ71DI3 136 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 RHOUQ7L0Q8 258 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 NAA40Q86UY6 237 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 ATG16L2Q8NAA4 619 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 FAM156AQ8NDB6 213 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 NPEPL1Q8NDH3 523 aa13.27□□□□□ -0.29
RAB40C-202ENST00000509637 OR1F12Q8NHA8 337 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms