RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 S100A11P31949 105 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 UBE2MP61081 183 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 OC90Q02509 493 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 PMPCAQ10713 525 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 AANATQ16613 207 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 TSSK4Q6SA08 328 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 PTX4Q96A99 478 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 C2orf68Q2NKX9 166 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 NHLRC3Q5JS37 347 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 IDO2Q6ZQW0 420 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 CHMP1BQ7LBR1 199 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 NFAM1Q8NET5 270 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 POFUT1Q9H488 388 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 FER1L5A0AVI2 2057 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 IGLV3-12A0A075B6K2 115 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 FXYD6-FXYD2A0A087WZ82 144 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 LOC390937A0A1W2PQ73 354 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 ZSCAN5BA6NJL1 495 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 P2RY10O00398 339 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF354AO60765 605 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 RP2O75695 350 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 PMS2P2O95744 297 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 BCKDHBP21953 392 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 FOXF1Q12946 379 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 KLHL24Q6TFL4 600 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 RNF133Q8WVZ7 376 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 FXYD6Q9H0Q3 95 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 ALKBH4Q9NXW9 302 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 KLRF1Q9NZS2 232 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF107Q9UII5 783 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 B3GALT5Q9Y2C3 310 aa16.02■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM82A0PJX8 343 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 METTL21EPA6NDL7 271 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 ZNF736B4DX44 427 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 H3BML4 177 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 EIF1AYO14602 144 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 LDLRAD4O15165 306 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 TOX3O15405 576 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 ALOX12BO75342 701 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 AMY2AP04746 511 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 M6PRP20645 277 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 MMP16P51512 607 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 ZNF41P51814 821 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 ACY1Q03154 408 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 NKAIN1Q4KMZ8 207 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 CORO6Q6QEF8 472 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 TMUB2Q71RG4 321 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 DNASE2BQ8WZ79 361 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 B3GNT4Q9C0J1 378 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 CHST6Q9GZX3 395 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 C1orf198Q9H425 327 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 RDH8Q9NYR8 311 aa16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 MYEF2Q9P2K5 600 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-228ENST00000509552 KIF26BQ2KJY2 2108 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 IGKV1D-43A0A0B4J1Z2 117 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 TRBV11-1A0A0K0K1C0 115 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 LIPT2A6NK58 231 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 GIMD1P0DJR0 217 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 NAGAP17050 411 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 RAB6AP20340 208 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 HLXQ14774 488 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 TMEM71Q6P5X7 295 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 OR5L2Q8NGL0 311 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 DHRS9Q9BPW9 319 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 PPP4R1LQ9P1A2 415 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 NUP50Q9UKX7 468 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 M0QYG6 137 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 OR4E1P0C645 316 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 PPP3CBP16298 524 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 BDKRB2P30411 391 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 BIDP55957 195 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 GPR85P60893 370 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 WDR45BQ5MNZ6 344 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 OR10K2Q6IF99 312 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 RAB12Q6IQ22 244 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 PAPD4Q6PIY7 484 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 FGGYQ96C11 551 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 SLAMF6Q96DU3 332 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 TINAGL1Q9GZM7 467 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 ARL6Q9H0F7 186 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 ZMAT3Q9HA38 289 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 ZNF224Q9NZL3 707 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 KCNN3Q9UGI6 736 aa16.01■□□□□ 0.15
CCHCR1-228ENST00000509552 H3BUI4 141 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 LMX1BO60663 402 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 MSX1P28360 303 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 GNALP38405 381 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 DCAF12L2Q5VW00 463 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 TMED4Q7Z7H5 227 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 ZNF584Q8IVC4 421 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 GALNT16Q8N428 558 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 C12orf45Q8N5I9 185 aaPredicted RBP16■□□□□ 0.15
CCHCR1-228ENST00000509552 OR4D6Q8NGJ1 314 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 C11orf40Q8WZ69 217 aa16■□□□□ 0.15
CCHCR1-228ENST00000509552 MESP1Q9BRJ9 268 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms