RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CNRIP1Q96F85 164 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ATXN7L3BQ96GX2 97 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR5M11Q96RB7 305 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SRXN1Q9BYN0 137 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PARLQ9H300 379 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM38AQ9H6F2 299 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 WDR54Q9H977 334 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMBIM4Q9HC24 238 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRSS16Q9NQE7 514 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 AGPAT4Q9NRZ5 378 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TREX1Q9NSU2 369 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CLEC5AQ9NY25 188 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR1A1Q9P1Q5 309 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 NXT1Q9UKK6 140 aaKnown RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MMP17Q9ULZ9 603 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 POFUT2Q9Y2G5 429 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TSSC4Q9Y5U2 329 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 V9GY05 133 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAD50Q92878 1312 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 COL22A1Q8NFW1 1626 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CNTNAP1P78357 1384 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ANKRD30BQ9BXX2 1392 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB3GAP2Q9H2M9 1393 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 FRMPD3Q5JV73 1810 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TRAV9-2A0A087WT02 112 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 A0A0A6YYD5 115 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 IGHV7-81A0A0B4J1V7 117 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TRAV39A0A0B4J263 110 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GLTPD2A6NH11 291 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM166BA8MTA8 275 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 MPTX1A8MV57 137 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GOLGA8KD6RF30 607 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SMKR1H3BMG3 65 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GOLGA8MH3BSY2 632 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF593O00488 134 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC9A3R1O14745 358 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TNFSF11O14788 317 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 UBDO15205 165 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 MBTPS2O43462 519 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SNAI2O43623 268 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SSNA1O43805 119 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ICOSLGO75144 302 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 NDUFS6O75380 124 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SCRG1O75711 98 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SC5DO75845 299 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC2A10O95528 541 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TDP2O95551 362 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TIMP1P01033 207 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PTHP01270 115 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SERPINA6P08185 405 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR5AL1P0C617 328 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC35E2BP0CK96 405 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF250P15622 560 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB4AP20338 218 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 LMO2P25791 158 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 MSNP26038 577 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRKAR2BP31323 418 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 OPRL1P41146 370 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 CDKN2CP42773 168 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GPR6P46095 362 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLCO1A2P46721 670 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GSSP48637 474 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TGM4P49221 684 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRLHRP49683 370 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 NDUFV3P56181 108 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 RHOAP61586 193 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SELENOTP62341 195 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SARNPP82979 210 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 REEP5Q00765 189 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF92Q03936 586 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 CD47Q08722 323 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 STX4Q12846 297 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ARFRP1Q13795 201 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 SERTAD2Q14140 314 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 CAPRIN1Q14444 709 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 MTF1Q14872 753 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ABRAXAS2Q15018 415 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PSG5Q15238 335 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMED2Q15363 201 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR7A5Q15622 319 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ATP6AP1Q15904 470 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GABRA6Q16445 453 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 TAL2Q16559 108 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 KCTD19Q17RG1 926 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 NSUN5P1Q3KNT7 163 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PDZD11Q5EBL8 140 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 KLF17Q5JT82 389 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 CDKL4Q5MAI5 379 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 THEM4Q5T1C6 240 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 KHDRBS2Q5VWX1 349 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 APOBEC3HQ6NTF7 200 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 GDPGP1Q6ZNW5 385 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 Q6ZSR9 355 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 LINC00336Q6ZUF6 198 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 MBOAT2Q6ZWT7 520 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ASCL5Q7RTU5 278 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 PUSL1Q8N0Z8 303 aaKnown RBP1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 ABHD12Q8N2K0 398 aa1.87□□□□□ -2.11
DEPDC1B-204ENST00000509006 CBR4Q8N4T8 237 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms