RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GYPBP06028 91 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 LCKP06239 509 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 SPARCP09486 303 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 OR4A8P0C604 315 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 DANCRP0C864 163 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 ANPEPP15144 967 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 PAX1P15863 534 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 GGT2P36268 569 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 NUDT6P53370 316 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 UCP2P55851 309 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 NKX6-1P78426 367 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 POU4F2Q12837 409 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MEP1BQ16820 701 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 PCK2Q16822 640 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 NXNL2Q5VZ03 156 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 TMEM236Q5W0B7 351 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 C12orf73Q69YU5 71 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 SLC18B1Q6NT16 456 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 ZNF774Q6NX45 483 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 VHLLQ6RSH7 139 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 UGT2A3Q6UWM9 527 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MYPOPQ86VE0 399 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 ERI1Q8IV48 349 aaKnown RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 CPOQ8IVL8 374 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 CPEB3Q8NE35 698 aaKnown RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 ZNF555Q8NEP9 628 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 OR5L1Q8NGL2 311 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 OR8J1Q8NGP2 316 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 LILRB1Q8NHL6 650 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 FGFBP3Q8TAT2 258 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 TMEM163Q8TC26 289 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 SPTSSAQ969W0 71 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 POM121L2Q96KW2 1035 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MNTQ99583 582 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 ATF6BQ99941 703 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 TRAF4Q9BUZ4 470 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 GSX2Q9BZM3 304 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 PLK3Q9H4B4 646 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 SP140LQ9H930 580 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 HINT3Q9NQE9 182 aaKnown RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 TBCCD1Q9NVR7 557 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 SLCO1C1Q9NYB5 712 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 CGGBP1Q9UFW8 167 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 LHFPL6Q9Y693 200 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 TMEM14AQ9Y6G1 99 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 CREBBPQ92793 2442 aa7.9□□□□□ -1.15
NUP54-207ENST00000508583 ARID1AO14497 2285 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ZNF878C9JN71 531 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 RER1O15258 196 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 SYNGR3O43761 229 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 TLX2O43763 284 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 PRKYO43930 277 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 SOD3P08294 240 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 GCH1P30793 250 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 LIPAP38571 399 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ART1P52961 327 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 TPTEP56180 551 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 KLF3P57682 345 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 GRB2P62993 217 aaKnown RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 HIST1H3AP68431 136 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 HGFACQ04756 655 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 TMED1Q13445 227 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 TAF13Q15543 124 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ADIPOQQ15848 244 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ZNF718Q3SXZ3 478 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ZMAT1Q5H9K5 638 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 HIST2H3PS2Q5TEC6 136 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 MEDAGQ5VYS4 303 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 SHEQ5VZ18 495 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 B3GLCTQ6Y288 498 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 HIST2H3AQ71DI3 136 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 OR51L1Q8NGJ5 315 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 OR6N2Q8NGY6 317 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 ABHD4Q8TB40 342 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 FAM81AQ8TBF8 368 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 SNX33Q8WV41 574 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 NEUROG1Q92886 237 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 PTP4A1Q93096 173 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 APOBEC3DQ96AK3 386 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 HRASLS5Q96KN8 279 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 C4orf45Q96LM5 186 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 MYCBPQ99417 103 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 APOL4Q9BPW4 351 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 COPS4Q9BT78 406 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 VCX3BQ9H321 246 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 LIME1Q9H400 295 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 TOR3AQ9H497 397 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 MARCH7Q9H992 704 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 DDX28Q9NUL7 540 aaKnown RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 ZNF701Q9NV72 531 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 MRPL22Q9NWU5 206 aaKnown RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 SMPD3Q9NY59 655 aaPredicted RBP7.89□□□□□ -1.15
NUP54-207ENST00000508583 POLQO75417 2590 aa7.89□□□□□ -1.15
NUP54-207ENST00000508583 CCDC168Q8NDH2 2452 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 LOC100509620A0A075B734 347 aa7.88□□□□□ -1.15
NUP54-207ENST00000508583 A0A1W2PPW3 197 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms