RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 ELOVL3Q9HB03 270 aa12.91□□□□□ -0.34
CLDND1-215ENST00000507874 HINT3Q9NQE9 182 aaKnown RBP12.91□□□□□ -0.34
CLDND1-215ENST00000507874 GPR160Q9UJ42 338 aa12.91□□□□□ -0.34
CLDND1-215ENST00000507874 FKBP6O75344 327 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 COL8A2P25067 703 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 GCH1P30793 250 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 PYCR1P32322 319 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 MAGEB1P43366 347 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 PPP2R2BQ00005 443 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 TEKQ02763 1124 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
CLDND1-215ENST00000507874 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 OR1F12Q8NHA8 337 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 SNX33Q8WV41 574 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 ZNRF4Q8WWF5 429 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 TBCCD1Q9NVR7 557 aa12.9□□□□□ -0.34
CLDND1-215ENST00000507874 MRPL22Q9NWU5 206 aaKnown RBP12.9□□□□□ -0.34
CLDND1-215ENST00000507874 C2CD3Q4AC94 2353 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 ARRDC5A6NEK1 342 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 GNGT2O14610 69 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
CLDND1-215ENST00000507874 DBHP09172 617 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 IGHV4-31P0DP07 118 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
CLDND1-215ENST00000507874 CBX1P83916 185 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 COX10Q12887 443 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 RIN1Q13671 783 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 MOGQ16653 247 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 ARL9Q6T311 187 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 CD300LDQ6UXZ3 194 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 HS3ST5Q8IZT8 346 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 PAPD5Q8NDF8 572 aaKnown RBP12.89□□□□□ -0.35
CLDND1-215ENST00000507874 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 GJC3Q8NFK1 279 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 SLCO4A1Q96BD0 722 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 PDP1Q9P0J1 537 aaPredicted RBP12.89□□□□□ -0.35
CLDND1-215ENST00000507874 ATPIF1Q9UII2 106 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 GRIP1Q9Y3R0 1128 aa12.89□□□□□ -0.35
CLDND1-215ENST00000507874 FN1P02751 2386 aaKnown RBP12.89□□□□□ -0.35
CLDND1-215ENST00000507874 CSPG4Q6UVK1 2322 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 H3BSA7 217 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 MMP15P51511 669 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 CCL8P80075 99 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 CRMP1Q14194 572 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 SLC18B1Q6NT16 456 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 LYPD4Q6UWN0 246 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 OR9Q1Q8NGQ5 310 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 OR2T4Q8NH00 348 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 RDH5Q92781 318 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 COQ7Q99807 217 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 RBM4Q9BWF3 364 aaKnown RBP12.88□□□□□ -0.35
CLDND1-215ENST00000507874 HDHD2Q9H0R4 259 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 STARD10Q9Y365 291 aa12.88□□□□□ -0.35
CLDND1-215ENST00000507874 ABCA1O95477 2261 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 TVP23AA6NH52 213 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 LILRA1O75019 489 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 E2F6O75461 281 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 TACSTD2P09758 323 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ZNF23P17027 643 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ACHEP22303 614 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 GGT2P36268 569 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 RASSF2P50749 326 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ZNF81P51508 661 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 PSG7Q13046 419 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 TRIP10Q15642 601 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 C6orf52Q5T4I8 152 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 PROKR2Q8NFJ6 384 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 TEX47Q8TBZ9 253 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 DCLRE1CQ96SD1 692 aaKnown RBP12.87□□□□□ -0.35
CLDND1-215ENST00000507874 YY1AP1Q9H869 796 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 CHODLQ9H9P2 273 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-215ENST00000507874 DNAJB9Q9UBS3 223 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 CYB5R1Q9UHQ9 305 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
CLDND1-215ENST00000507874 H3BN98 237 aa12.86□□□□□ -0.35
CLDND1-215ENST00000507874 SPRY3O43610 288 aa12.86□□□□□ -0.35
CLDND1-215ENST00000507874 RP2O75695 350 aa12.86□□□□□ -0.35
CLDND1-215ENST00000507874 ATP5HO75947 161 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms