RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 GALNT14Q96FL9 552 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 PDXPQ96GD0 296 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 XPO6Q96QU8 1125 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 MICU1Q9BPX6 476 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 TEKT3Q9BXF9 490 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ACTR3CQ9C0K3 210 aaPredicted RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 SLC7A5P2Q9GIP4 190 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 PARP12Q9H0J9 701 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 AUNIPQ9H7T9 357 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 NTN4Q9HB63 628 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ACP6Q9NPH0 428 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 AGPAT4Q9NRZ5 378 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 SAMSN1Q9NSI8 373 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 GPATCH8Q9UKJ3 1502 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 TBC1D24Q9ULP9 559 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 COL22A1Q8NFW1 1626 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 TNS2Q63HR2 1409 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 IGKV2D-24A0A075B6R9 120 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 KBTBD11-OT1A0A1B0GTJ5 212 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 ZNF705GA8MUZ8 300 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 WRBO00258 174 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 SLC9A3R1O14745 358 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 ZNF207O43670 478 aaKnown RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 GCM2O75603 506 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 NBL1P41271 181 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 LOXL1Q08397 574 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 EIF4EBP1Q13541 118 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 STK11Q15831 433 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 KHDRBS2Q5VWX1 349 aaKnown RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 RIMKLAQ8IXN7 391 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 OR56A4Q8NGH8 313 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 UBALD1Q8TB05 177 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 TM4SF18Q96CE8 201 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 STARD4Q96DR4 205 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 DNAJC1Q96KC8 554 aaKnown RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 UCK2Q9BZX2 261 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 SPNS1Q9H2V7 528 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 TMEM38AQ9H6F2 299 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 SYNDIG1Q9H7V2 258 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 WFDC1Q9HC57 220 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 ZDHHC4Q9NPG8 344 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 CLN8Q9UBY8 286 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 OPN4Q9UHM6 478 aa2.03□□□□□ -2.08
LSM6-205ENST00000507449 YTHDF2Q9Y5A9 579 aaKnown RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 TSSC4Q9Y5U2 329 aaPredicted RBP2.03□□□□□ -2.08
LSM6-205ENST00000507449 ADAMTS13Q76LX8 1427 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 PIKFYVEQ9Y2I7 2098 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 UBN2Q6ZU65 1347 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 ZNFX1Q9P2E3 1918 aaKnown RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 KCNE1BA0A087WTH5 132 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 H7C417 338 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 RTL8CO15255 209 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 RAD51CO43502 376 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 WISP3O95389 354 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 CTDNEP1O95476 244 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 ASGR1P07306 291 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 CD3GP09693 182 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 CSNK2A2P19784 350 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 TCN2P20062 427 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 GSTM3P21266 225 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 U2AF2P26368 475 aaKnown RBP eCLIP2.02□□□□□ -2.09
LSM6-205ENST00000507449 KIR3DL2P43630 455 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 UBE2MP61081 183 aaKnown RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 SEMG2Q02383 582 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 CDH17Q12864 832 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 MOBPQ13875 183 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 PSMD5Q16401 504 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 UBE2SQ16763 222 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 XKR4Q5GH76 650 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 THEM4Q5T1C6 240 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 NPSR1Q6W5P4 371 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 WDR86Q86TI4 376 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 ARRDC1Q8N5I2 433 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 TTC29Q8NA56 475 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 OR52E2Q8NGJ4 325 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 C15orf40Q8WUR7 153 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 LRRC29Q8WV35 223 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 TMEM230Q96A57 120 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 FOPNLQ96NB1 174 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 ZNF317Q96PQ6 595 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 MTG1Q9BT17 334 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 ELOVL6Q9H5J4 265 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 LYRM4Q9HD34 91 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 MRPS30Q9NP92 439 aaKnown RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 ZNF355PQ9NSJ1 428 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 C20orf96Q9NUD7 363 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 NECAP2Q9NVZ3 263 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 PDP1Q9P0J1 537 aaPredicted RBP2.02□□□□□ -2.09
LSM6-205ENST00000507449 MTFP1Q9UDX5 166 aa2.02□□□□□ -2.09
LSM6-205ENST00000507449 IGLV1-50A0A075B6I6 118 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 TRAV25A0A0B4J276 109 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 A0A0U1RQV1 116 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 A0A1W2PP18 115 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 LRCOL1A6NCL2 159 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 H7C1H1 209 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 MAGEB4O15481 346 aaPredicted RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 RDH16O75452 317 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 MED6O75586 246 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 CCNB2O95067 398 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms