RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 DIRC2Q96SL1 478 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 CDADC1Q9BWV3 514 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 POLR2J2Q9GZM3 115 aaKnown RBP11.17□□□□□ -0.62
DDX41-206ENST00000506965 POLR2J3Q9H1A7 115 aaKnown RBP11.17□□□□□ -0.62
DDX41-206ENST00000506965 ELOVL3Q9HB03 270 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 BAG5Q9UL15 447 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
DDX41-206ENST00000506965 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 DCTN6O00399 190 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 KDELR2P33947 212 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 MDH2P40926 338 aaKnown RBP11.16□□□□□ -0.62
DDX41-206ENST00000506965 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 LRRC23Q53EV4 343 aaPredicted RBP11.16□□□□□ -0.62
DDX41-206ENST00000506965 OR2T2Q6IF00 324 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 C1orf94Q6P1W5 598 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 RHOUQ7L0Q8 258 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 SYT9Q86SS6 491 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 KLBQ86Z14 1044 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 ALDH16A1Q8IZ83 802 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 OFCC1Q8IZS5 231 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 KLHL36Q8N4N3 616 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 C19orf18Q8NEA5 215 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 RBP7Q96R05 134 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 TMEM246Q9BRR3 403 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
DDX41-206ENST00000506965 STX18Q9P2W9 335 aaKnown RBP11.16□□□□□ -0.62
DDX41-206ENST00000506965 C12orf71A8MTZ7 269 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 C22orf46C9J442 243 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 RER1O15258 196 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
DDX41-206ENST00000506965 SGCEO43556 437 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 SLC9A3P48764 834 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 PCBD1P61457 104 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 SF3A3Q12874 501 aaKnown RBP eCLIP11.15□□□□□ -0.622e-7■■■■■ 27.2
DDX41-206ENST00000506965 KLF10Q13118 480 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 MEP1BQ16820 701 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 NPEPL1Q8NDH3 523 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 TPD52L3Q96J77 140 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 MAGEB18Q96M61 343 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
DDX41-206ENST00000506965 WDR76Q9H967 626 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 CMTM6Q9NX76 183 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 PTTG3PQ9NZH4 202 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 ASH2LQ9UBL3 628 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
DDX41-206ENST00000506965 NDRG4Q9ULP0 352 aaKnown RBP11.15□□□□□ -0.62
DDX41-206ENST00000506965 A0A0G2JND7 137 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 C5orf63A6NC05 138 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 EFCAB9A8MZ26 197 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 F5H5P2 479 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 MRASO14807 208 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 GSTM3P21266 225 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ARHGDIAP52565 204 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 SELENOWP63302 87 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 HIST1H3AP68431 136 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 IL13RA1P78552 427 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
DDX41-206ENST00000506965 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ZNF404Q494X3 552 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 MIDNQ504T8 468 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ZMAT1Q5H9K5 638 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 HIST2H3PS2Q5TEC6 136 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 FBXW12Q6X9E4 464 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 RBMS3Q6XE24 437 aaKnown RBP11.14□□□□□ -0.63
DDX41-206ENST00000506965 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 OAFQ86UD1 273 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 MOGAT3Q86VF5 341 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 TSSK2Q96PF2 358 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 GPA33Q99795 319 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ECSITQ9BQ95 431 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 SLC30A2Q9BRI3 323 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 MRI1Q9BV20 369 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 TMEM120AQ9BXJ8 343 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
DDX41-206ENST00000506965 SLITRK2Q9H156 845 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
DDX41-206ENST00000506965 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms