RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PBLDP30039 288 aaPredicted RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 CEACAM3P40198 252 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 NAA10P41227 235 aaPredicted RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 KIR3DL2P43630 455 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 TNNT2P45379 298 aaPredicted RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 ACLYP53396 1101 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 IDI1Q13907 227 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CHRNA6Q15825 494 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CCDC183Q5T5S1 534 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 UBE2UQ5VVX9 321 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 ZFP41Q8N8Y5 198 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 OR7G2Q8NG99 324 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 PHF10Q8WUB8 498 aaKnown RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 KIFAP3Q92845 792 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CCDC126Q96EE4 140 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 ZNF488Q96MN9 340 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 TIMM29Q9BSF4 260 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 WFDC1Q9HC57 220 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 NMRK1Q9NWW6 199 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 DCAF16Q9NXF7 216 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 TSPOAP1O95153 1857 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 USP47Q96K76 1375 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 SHROOM3Q8TF72 1996 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 FAM47DPA6NHR8 397 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 H0YJW9 148 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CHST1O43916 411 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 UQCRFS1P1P0C7P4 283 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CT45A6P0DMU7 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CT45A5P0DMU8 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CT45A7P0DMV0 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 TROVE2P10155 538 aaKnown RBP eCLIP1.42□□□□□ -2.18
GYPB-207ENST00000506679 ATF6P18850 670 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 TNNI1P19237 187 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 RAB3AP20336 220 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CSNK1EP49674 416 aaKnown RBP1.42□□□□□ -2.18
GYPB-207ENST00000506679 CDH6P55285 790 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 UBE2NP61088 152 aaKnown RBP1.42□□□□□ -2.18
GYPB-207ENST00000506679 PITPNAQ00169 270 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 ZNF616Q08AN1 781 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 QPRTQ15274 297 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 PPP1R7Q15435 360 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CT45A1Q5HYN5 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 UNQ9165/PRO28630Q6UXU0 137 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 ZYG11AQ6WRX3 759 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 FAM228AQ86W67 206 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 WDFY1Q8IWB7 410 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CDH26Q8IXH8 852 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 IQCKQ8N0W5 287 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 METTL13Q8N6R0 699 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 NPWQ8N729 165 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 PRELID2Q8N945 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 OR10AD1Q8NGE0 317 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 OR56B2PQ8NGI1 322 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 LILRB4Q8NHJ6 448 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CT45A3Q8NHU0 189 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 ELMO1Q92556 727 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 PTX4Q96A99 478 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 RASD2Q96D21 266 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 TIMM17AQ99595 171 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 SLC29A1Q99808 456 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CCDC77Q9BR77 488 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 LGALS13Q9UHV8 139 aa1.42□□□□□ -2.18
GYPB-207ENST00000506679 CTAGE15A4D2H0 777 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 K7EM74 188 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 K7EMT4 169 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 REM1O75628 298 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 AQP8O94778 261 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 CDRT1O95170 752 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SERPINE2P07093 398 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 OR8U9P0C7N5 309 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SYNJ2BPP57105 145 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 CCNA1P78396 465 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 RCAN2Q14206 197 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 PGGHGQ32M88 737 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 XKR7Q5GH72 579 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SLC8B1Q6J4K2 584 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 ZFP1Q6P2D0 407 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 METAP1DQ6UB28 335 aaPredicted RBP1.41□□□□□ -2.18
GYPB-207ENST00000506679 TMEM150AQ86TG1 271 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 CTAGE6Q86UF2 777 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SLC22A9Q8IVM8 553 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SPANXA2-OT1Q8N9U9 137 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 C11orf72Q8NBR9 251 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 OR5B3Q8NH48 314 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 AKR7LQ8NHP1 331 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 ACMSDQ8TDX5 336 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 RTN4IP1Q8WWV3 396 aaPredicted RBP1.41□□□□□ -2.18
GYPB-207ENST00000506679 DNAJC1Q96KC8 554 aaKnown RBP1.41□□□□□ -2.18
GYPB-207ENST00000506679 COL21A1Q96P44 957 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 OR5B12Q96R08 314 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 SULT4A1Q9BR01 284 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 ZNF717Q9BY31 904 aaPredicted RBP1.41□□□□□ -2.18
GYPB-207ENST00000506679 SAMD10Q9BYL1 202 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 TMEM9BQ9NQ34 198 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 HRASLS2Q9NWW9 162 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 PALLDQ8WX93 1383 aa1.41□□□□□ -2.18
GYPB-207ENST00000506679 COL22A1Q8NFW1 1626 aaPredicted RBP1.4□□□□□ -2.18
GYPB-207ENST00000506679 SEC16AO15027 2179 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 TRAV6A0A075B6T7 132 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 TRBV9A0A0B4J1U6 114 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms