RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HIST1H3AP68431 136 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TEKQ02763 1124 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CCDC92Q53HC0 331 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 HIST2H3PS2Q5TEC6 136 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 OTPQ5XKR4 325 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 C1orf94Q6P1W5 598 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 PGBD2Q6P3X8 592 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF620Q6ZNG0 422 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 USP51Q70EK9 711 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 HIST2H3AQ71DI3 136 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ZDHHC21Q8IVQ6 265 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 NPEPL1Q8NDH3 523 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 FANK1Q8TC84 345 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 MCUR1Q96AQ8 359 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TSSK2Q96PF2 358 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ERMAPQ96PL5 475 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CCT8L2Q96SF2 557 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 POFUT1Q9H488 388 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 SAP30LQ9HAJ7 183 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 SRA1Q9HD15 236 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TUBG2Q9NRH3 451 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CYSLTR2Q9NS75 346 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ACTR3BQ9P1U1 418 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ASH2LQ9UBL3 628 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CGGBP1Q9UFW8 167 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 LYVE1Q9Y5Y7 322 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CACNG2Q9Y698 323 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TCRBV5S2A0A599 114 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 J3QW42 95 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 RER1O15258 196 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PHF1O43189 567 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 SPRY3O43610 288 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 IDH3BO43837 385 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 OR10H3O60404 316 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 CDC14BO60729 498 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 DEAF1O75398 565 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 UBOX5O94941 541 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 FAM107AO95990 144 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 HIST1H1CP16403 213 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 KITLGP21583 273 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC6A6P31641 620 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 MNAT1P51948 309 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ARHGDIAP52565 204 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 COX10Q12887 443 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 TSPAN31Q12999 210 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PSG7Q13046 419 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 CDK5R2Q13319 367 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 TSTQ16762 297 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 SPRNQ5BIV9 151 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 MTX3Q5HYI7 312 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 LCN8Q6JVE9 175 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PGM2L1Q6PCE3 622 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 DNM1P34Q6PK57 102 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ARL9Q6T311 187 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ZBTB46Q86UZ6 589 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PHC2Q8IXK0 858 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 OR6V1Q8N148 313 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ARHGAP24Q8N264 748 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 OR4C15Q8NGM1 316 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 OR1F12Q8NHA8 337 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC7A6Q92536 515 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ELMOD3Q96FG2 381 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 SAMD8Q96LT4 415 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 NMNAT3Q96T66 252 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 DDOQ99489 341 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 BTBD10Q9BSF8 475 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 MUC13Q9H3R2 512 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 NARFLQ9H6Q4 476 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 DECR2Q9NUI1 292 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PLEK2Q9NYT0 353 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 TREM2Q9NZC2 230 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 TMEFF2Q9UIK5 374 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 ZDHHC8Q9ULC8 765 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 B9D1Q9UPM9 204 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 STARD10Q9Y365 291 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 LHFPL6Q9Y693 200 aa7.7□□□□□ -1.18
PDLIM5-209ENST00000506632 PLSCR5A0PG75 271 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 RNF212BA8MTL3 300 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 B2RBV5 119 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 CLDN25C9JDP6 229 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 KRT36O76013 467 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 GPANK1O95872 356 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 MSMBP08118 114 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 DBHP09172 617 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 T-ENOLP0DO92 83 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 GSTM3P21266 225 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 IFNGR2P38484 337 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 RGS6P49758 472 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 MXRA7P84157 204 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 DBPQ10586 325 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 MEP1BQ16820 701 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 RSPO1Q2MKA7 263 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 HFEQ30201 348 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 KRTAP27-1Q3LI81 207 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 ZMAT1Q5H9K5 638 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF770Q6IQ21 691 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 LEG1Q6P5S2 330 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 CYP2R1Q6VVX0 501 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 FBXW12Q6X9E4 464 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms