RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RFX4Q33E94 735 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 MTX3Q5HYI7 312 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 GLB1L2Q8IW92 636 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 RAB1CQ92928 201 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 HAVCR1Q96D42 359 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 CDRT15Q96T59 188 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 TMPRSS13Q9BYE2 586 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 ARL8BQ9NVJ2 186 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 ASH2LQ9UBL3 628 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 PURGQ9UJV8 347 aaKnown RBP12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 ZDHHC8Q9ULC8 765 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 B9D1Q9UPM9 204 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 SAMD4AQ9UPU9 718 aaKnown RBP12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 AURKCQ9UQB9 309 aa12.18□□□□□ -0.46
CDC42SE2-209ENST00000506419 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 PPP1R3DO95685 299 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 HSD17B1P14061 328 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 ANPEPP15144 967 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 KITLGP21583 273 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 KRT72Q14CN4 511 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 MEP1BQ16820 701 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 HIST2H3PS2Q5TEC6 136 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 C1orf94Q6P1W5 598 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 SMARCD3Q6STE5 483 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 ARL9Q6T311 187 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 HIST2H3AQ71DI3 136 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 ZNF771Q7L3S4 317 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 OR6V1Q8N148 313 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 EGLN1Q9GZT9 426 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 PLEK2Q9NYT0 353 aa12.17□□□□□ -0.46
CDC42SE2-209ENST00000506419 NBEAL1Q6ZS30 2694 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 LOC105371242A0A075B767 164 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 IGLV1-36A0A0B4J1U3 117 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 TUBG1P23258 451 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 TNFAIP6P98066 277 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 AQP6Q13520 282 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 CORO6Q6QEF8 472 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 ERMAPQ96PL5 475 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 DCLRE1CQ96SD1 692 aaKnown RBP12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 DIRC2Q96SL1 478 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
CDC42SE2-209ENST00000506419 ARPC3O15145 178 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 GMNNO75496 209 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 GADD45GO95257 159 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 PNPP00491 289 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 SBK2P0C263 348 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 HIST1H1CP16403 213 aaKnown RBP12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 CENPAP49450 140 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 SMIM11AP58511 58 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 HLXQ14774 488 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 ADCK1Q86TW2 530 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 PGAM4Q8N0Y7 254 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 NPEPL1Q8NDH3 523 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 OR4K13Q8NH42 304 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 SAMD8Q96LT4 415 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 NMNAT3Q96T66 252 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 NDEL1Q9GZM8 345 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 OR52D1Q9H346 318 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 OPN4Q9UHM6 478 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
CDC42SE2-209ENST00000506419 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 ARPC2O15144 300 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 IGHV2-70P01814 119 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 ADRA2CP18825 462 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 GSTM3P21266 225 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 FPR3P25089 353 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 GSSP48637 474 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 LCN2P80188 198 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 SPIBQ01892 262 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 KRTAP27-1Q3LI81 207 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 SAMD4BQ5PRF9 694 aaKnown RBP12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 LEG1Q6P5S2 330 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 NSMCE2Q96MF7 247 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 DDOQ99489 341 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 GAL3ST1Q99999 423 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms