RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 TRPC4Q9UBN4 977 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 SLC13A4Q9UKG4 626 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TSPAN16Q9UKR8 245 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 NTNG1Q9Y2I2 539 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TCRBV9S1A1TA0A576 114 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 EFCAB9A8MZ26 197 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 SLC16A5O15375 505 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 LYRM1O43325 122 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR6A2O95222 327 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2ABP04908 130 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HTR1EP28566 365 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 GKP32189 559 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 ZNF81P51508 661 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 MXD1Q05195 221 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TMED2Q15363 201 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 DECR1Q16698 335 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 DCAF4L1Q3SXM0 396 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 ANKRD34AQ69YU3 496 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 DGAT2L7PQ6IED9 249 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 CES3Q6UWW8 571 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 FOXI2Q6ZQN5 318 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 Q71RC1 249 aaPredicted RBP2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HIST3H2AQ7L7L0 130 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 PID1Q7Z2X4 250 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TAF8Q7Z7C8 310 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TMEM179BQ7Z7N9 219 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 DTX1Q86Y01 620 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 TMEM25Q86YD3 366 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR11G2Q8NGC1 345 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR10AD1Q8NGE0 317 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR56A4Q8NGH8 313 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR5L2Q8NGL0 311 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR2G2Q8NGZ5 317 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 OR5W2Q8NH69 310 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 GNPDA2Q8TDQ7 276 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2ACQ93077 130 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 ZNF503Q96F45 646 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 C12orf66Q96MD2 445 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 COQ10AQ96MF6 247 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 LYSMD1Q96S90 227 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BLQ99880 126 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 THAP7Q9BT49 309 aaPredicted RBP2.02□□□□□ -2.09
NEDD4-205ENST00000506154 C1orf198Q9H425 327 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 SEC61A2Q9H9S3 476 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 ZC4H2Q9NQZ6 224 aa2.02□□□□□ -2.09
NEDD4-205ENST00000506154 CFAP20Q9Y6A4 193 aaKnown RBP2.02□□□□□ -2.09
NEDD4-205ENST00000506154 HYKKA2RU49 373 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 FAM183AA6NL82 134 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 TMEM178BH3BS89 294 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 TIMP1P01033 207 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 DCNP07585 359 aaKnown RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 UMODP07911 640 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 OR5AC1P0C628 307 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 ANKRD34CP0C6C1 535 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CISD3P0C7P0 127 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 VSIG8P0DPA2 414 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 GTF2F2P13984 249 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 KITLGP21583 273 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 MMP11P24347 488 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CD80P33681 288 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 RND2P52198 227 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CDH11P55287 796 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 OR2B8PP59922 312 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 EGR4Q05215 589 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CHRNB3Q05901 458 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 PTPRCAPQ14761 206 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 PAFAH1B3Q15102 231 aaKnown RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 PTGES3Q15185 160 aaKnown RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 MLANAQ16655 118 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 ODF3L2Q3SX64 289 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 INO80CQ6PI98 192 aaPredicted RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 FAM180AQ6UWF9 173 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CYP2R1Q6VVX0 501 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CYP4Z1Q86W10 505 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 SLC26A11Q86WA9 606 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 STXBP6Q8NFX7 210 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 SLC25A43Q8WUT9 341 aaPredicted RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 FICDQ9BVA6 458 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 INPP5EQ9NRR6 644 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 MLXQ9UH92 298 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 CD84Q9UIB8 345 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 TRAV14DV4A0A0A6YYC5 116 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 EXOC1LA0A1B0GW35 172 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 MSGN1A6NI15 193 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 C9JQL5 133 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HSPA12AO43301 675 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BKO60814 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 OR2J2O76002 312 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BJP06899 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 RNASE1P07998 156 aaKnown RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 THRBP10828 461 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HOXB6P17509 224 aaKnown RBP2.01□□□□□ -2.09
NEDD4-205ENST00000506154 GGT1P19440 569 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 DRD5P21918 477 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BOP23527 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BBP33778 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BDP58876 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 HIST1H2BCP62807 126 aa2.01□□□□□ -2.09
NEDD4-205ENST00000506154 BIKQ13323 160 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms