RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 OR2AT4A6NND4 320 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 CLDN4O14493 209 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 XKRYO14609 159 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 PHYHO14832 338 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 DCNP07585 359 aaKnown RBP10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HLA-DOBP13765 273 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HHEXQ03014 270 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 EIF2B1Q14232 305 aaKnown RBP10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HFEQ30201 348 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 CDNFQ49AH0 187 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 LYG2Q86SG7 212 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 FJX1Q86VR8 437 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 METTL21AQ8WXB1 218 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HERVK_113Q902F9 699 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 AQP3Q92482 292 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 ASF1BQ9NVP2 202 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 MBD2Q9UBB5 411 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 SLCO1B1Q9Y6L6 691 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 FAM221BA6H8Z2 402 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HSPB2A8KAH6 182 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 RAB27BO00194 218 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HCRTR2O43614 444 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 HSPB2Q16082 182 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 RNF144BQ7Z419 303 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 OOSP2Q86WS3 158 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 NUDCD2Q8WVJ2 157 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 MAP3K3Q99759 626 aa10.65□□□□□ -0.7
UBE3D-206ENST00000505226 GDF2Q9UK05 429 aaPredicted RBP10.65□□□□□ -0.7
UBE3D-206ENST00000505226 SEC16AO15027 2179 aa10.65□□□□□ -0.71
UBE3D-206ENST00000505226 CPAMD8Q8IZJ3 1885 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 F5H0A9 414 aaPredicted RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 IL2RAP01589 272 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 HLA-GP17693 338 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 CD96P40200 585 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 EFNA3P52797 238 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 RPL27P61353 136 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 SKP1P63208 163 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 UNC119Q13432 240 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 STK11Q15831 433 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF260Q3ZCT1 412 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 CASTOR1Q8WTX7 329 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 MITD1Q8WV92 249 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 ASB17Q8WXJ9 295 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 G6PC2Q9NQR9 355 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PNO1Q9NRX1 252 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 SLC39A1Q9NY26 324 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 COMMD9Q9P000 198 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 MRPS33Q9Y291 106 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 COA3Q9Y2R0 106 aaPredicted RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 EEF1E1-BLOC1S5C9J1V9 151 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 LINC01565O15544 149 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 FSTP19883 344 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 IL11P20809 199 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 KCTD9Q7L273 389 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF584Q8IVC4 421 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 OR13C3Q8NGS6 347 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 FAM46BQ96A09 425 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 RRNAD1Q96FB5 475 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PHYHIPLQ96FC7 376 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 OR8D2Q9GZM6 311 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PIGMQ9H3S5 423 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 CNTD2Q9H8S5 307 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 CKLFQ9UBR5 152 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 SLC5A6Q9Y289 635 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 RP1P56715 2156 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 MYO9BQ13459 2157 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PCDH15Q96QU1 1955 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 LOC107986453A0A1B0GWG9 222 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 DISC1C4P0D8 188 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 EFSO43281 561 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 FADS1O60427 444 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 OR6A2O95222 327 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 ERCC1P07992 297 aaPredicted RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PGAM2P15259 253 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 CXCR1P25024 350 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 RIDAP52758 137 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 IL13RA1P78552 427 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PRAMEF17Q5VTA0 474 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 LPCAT3Q6P1A2 487 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM71Q6P5X7 295 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 TRAPPC6BQ86SZ2 158 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 FAM219AQ8IW50 185 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 TSNAXQ99598 290 aaKnown RBP10.64□□□□□ -0.71
UBE3D-206ENST00000505226 OR11A1Q9GZK7 315 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 PRODH2Q9UF12 536 aa10.64□□□□□ -0.71
UBE3D-206ENST00000505226 LOC390937A0A1W2PQ73 354 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 TNFP01375 233 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 HRH1P35367 487 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 PPICP45877 212 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 CCINQ13939 588 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 PLEKHN1Q494U1 663 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms