RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 DBHP09172 617 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 PTAFRP25105 342 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 STOMP27105 288 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 HTR5AP47898 357 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 PCK2Q16822 640 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 TEX30Q5JUR7 227 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 ELFN2Q5R3F8 820 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC25A30Q5SVS4 291 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 LAIR2Q6ISS4 152 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC22A25Q6T423 547 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC16A9Q7RTY1 509 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 C8orf59Q8N0T1 100 aaPredicted RBP11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 FAM169BQ8N8A8 192 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 SETD9Q8NE22 299 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 GJC3Q8NFK1 279 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 OR4F15Q8NGB8 312 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 OR1F12Q8NHA8 337 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 LILRB1Q8NHL6 650 aaPredicted RBP11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 RNFT2Q96EX2 444 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 POM121L2Q96KW2 1035 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 ABHD6Q9BV23 337 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 WARS2Q9UGM6 360 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 FAM221AA4D161 298 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 C5orf49A4QMS7 147 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 PRR32B1ATL7 298 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 PSMD9O00233 223 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 MAGEB4O15481 346 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SYNGR3O43761 229 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 MPZL2O60487 215 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 TMCC2O75069 709 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SBK2P0C263 348 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 ZNF35P13682 527 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 APLNRP35414 380 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 GDI2P50395 445 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 KRTAP10-9P60411 292 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 HGFACQ04756 655 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 ZNF91Q05481 1191 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 CDK5R2Q13319 367 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 IL18R1Q13478 541 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 GGTLC2Q14390 218 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 RAB35Q15286 201 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 RSPO1Q2MKA7 263 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 C3orf36Q3SXR2 165 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 C1QTNF12Q5T7M4 302 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 MEDAGQ5VYS4 303 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 CDC20BQ86Y33 519 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC35F2Q8IXU6 374 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 ALDH16A1Q8IZ83 802 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 ST7LQ8TDW4 575 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 RFKQ969G6 155 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 SLAMF6Q96DU3 332 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 CNN2Q99439 309 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 KCNS3Q9BQ31 491 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 RHNO1Q9BSD3 238 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 C1orf198Q9H425 327 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 CDH20Q9HBT6 801 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 PCDHGB5Q9Y5G0 923 aa11.48□□□□□ -0.57
PDLIM7-212ENST00000504380 OR6C6A6NF89 314 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 CRYAAP02489 173 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 FAM157BP0CG42 384 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 DBTP11182 482 aaKnown RBP11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 ALOX5APP20292 161 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 ATP6V1E1P36543 226 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 MTNR1AP48039 350 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 NR1H2P55055 460 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 GALK2Q01415 458 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 TBC1D28Q2M2D7 210 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 SSX6Q7RTT6 188 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 THAP5Q7Z6K1 395 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 NAA40Q86UY6 237 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 OTOSQ8NHW6 89 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 AKAP1Q92667 903 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 NRGNQ92686 78 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 LGALS12Q96DT0 336 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 C14orf79Q96F83 325 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 Q96MT0 163 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 WACQ9BTA9 647 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 CLEC4MQ9H2X3 399 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 HAO2Q9NYQ3 351 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 POU2F3Q9UKI9 436 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.47□□□□□ -0.574e-7■■■■■ 30.8
PDLIM7-212ENST00000504380 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
PDLIM7-212ENST00000504380 ABCA4P78363 2273 aa11.46□□□□□ -0.57
PDLIM7-212ENST00000504380 E7EQL1 145 aa11.46□□□□□ -0.57
PDLIM7-212ENST00000504380 F5H5K5 113 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms