RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
PDLIM7-211ENST00000504318 IL1RAPQ9NPH3 570 aa11.88□□□□□ -0.51
PDLIM7-211ENST00000504318 TBCCD1Q9NVR7 557 aa11.88□□□□□ -0.51
PDLIM7-211ENST00000504318 COA3Q9Y2R0 106 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-211ENST00000504318 V9GYQ6 96 aa11.88□□□□□ -0.51
PDLIM7-211ENST00000504318 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 DYSFO75923 2080 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 WNK2Q9Y3S1 2297 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 TCRBV5S2A0A599 114 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 C12orf71A8MTZ7 269 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 SOCS2O14508 198 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ACOT8O14734 319 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ARPC3O15145 178 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 SLC16A7O60669 478 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 CD55P08174 381 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ATP6V1B2P21281 511 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 FPR3P25089 353 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 RBMXP38159 391 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 MAGEA2P43356 314 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ERFP50548 548 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 HMGA2P52926 109 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 SLC34A1Q06495 639 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 PSG7Q13046 419 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 AQP6Q13520 282 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 RFX4Q33E94 735 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 FAM209AQ5JX71 171 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 C1orf94Q6P1W5 598 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ADCK1Q86TW2 530 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 DHFR2Q86XF0 187 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 ICA1LQ8NDH6 482 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 OR52D1Q9H346 318 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 NDRG4Q9ULP0 352 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 FAM32AQ9Y421 112 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 LHFPL6Q9Y693 200 aa11.87□□□□□ -0.51
PDLIM7-211ENST00000504318 B4DSR2 109 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 XKRYO14609 159 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 RER1O15258 196 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SGCEO43556 437 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 DOK2O60496 412 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 CDC14BO60729 498 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 GMNNO75496 209 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 KHDRBS3O75525 346 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 GADD45GO95257 159 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 PPP1R3DO95685 299 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 TFP02787 698 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 KITLGP21583 273 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 RRM2P31350 389 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ZNF81P51508 661 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SELENOVP59797 346 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SPIBQ01892 262 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SCRN3Q0VDG4 424 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 MEP1BQ16820 701 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 PGBD2Q6P3X8 592 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 C1orf229Q6ZS94 237 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 USP51Q70EK9 711 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 RRM2BQ7LG56 351 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SPATA24Q86W54 205 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 OR6V1Q8N148 313 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 SNX33Q8WV41 574 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 VCX3BQ9H321 246 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 NARFLQ9H6Q4 476 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ASH2LQ9UBL3 628 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 EIF3KQ9UBQ5 218 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 TMEFF2Q9UIK5 374 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 GPR160Q9UJ42 338 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
PDLIM7-211ENST00000504318 AQP12BA6NM10 295 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 RNF212BA8MTL3 300 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 FABP3P05413 133 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 DBHP09172 617 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 PSKH1P11801 424 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 ANPEPP15144 967 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 HIST1H1CP16403 213 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 ITGA2P17301 1181 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 ANOS1P23352 680 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 CDK5R2Q13319 367 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 MOGQ16653 247 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 TSTQ16762 297 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 MTX3Q5HYI7 312 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 ZNF362Q5T0B9 420 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 ZBTB46Q86UZ6 589 aa11.85□□□□□ -0.51
PDLIM7-211ENST00000504318 GLB1L2Q8IW92 636 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms