RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 GIPRP48546 466 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 RAB1AP62820 205 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 IL13RA1P78552 427 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 HIST3H3Q16695 136 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 ZNF813Q6ZN06 617 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 DPY19L2P2Q6ZN68 376 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 ZNF620Q6ZNG0 422 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 DOK3Q7L591 496 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 FAM122BQ7Z309 247 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
DDR1-250ENST00000503628 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
DDR1-250ENST00000503628 DGCR6LQ9BY27 220 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 OR52D1Q9H346 318 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 NRIP3Q9NQ35 241 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 HINT3Q9NQE9 182 aaKnown RBP13.41□□□□□ -0.26
DDR1-250ENST00000503628 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 GRHPRQ9UBQ7 328 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 WIPI2Q9Y4P8 454 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 IGHV1-69-2A0A0G2JMI3 117 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 A6NIZ1 184 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 QDPRP09417 244 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 FCGR1AP12314 374 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RAP1BP61224 184 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RAP1AP62834 184 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 LCN2P80188 198 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RAB39AQ14964 217 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 ATP6AP1Q15904 470 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RFX4Q33E94 735 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 TMEM154Q6P9G4 183 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 LRFN4Q6PJG9 635 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RASSF6Q6ZTQ3 369 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 ZNF771Q7L3S4 317 aaPredicted RBP13.4□□□□□ -0.26
DDR1-250ENST00000503628 ZNF570Q96NI8 536 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 ALG12Q9BV10 488 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 SLITRK2Q9H156 845 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 PDP1Q9P0J1 537 aaPredicted RBP13.4□□□□□ -0.26
DDR1-250ENST00000503628 POFUT2Q9Y2G5 429 aa13.4□□□□□ -0.26
DDR1-250ENST00000503628 RAB36O95755 333 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 NR2C1P13056 603 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 B4GALT1P15291 398 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 GSTM3P21266 225 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 FASP25445 335 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 SDHAP31040 664 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 SLC6A6P31641 620 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 RPS6KA3P51812 740 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 TEKQ02763 1124 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 CD47Q08722 323 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 BAMBIQ13145 260 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 ZSCAN26Q16670 478 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 GPR139Q6DWJ6 353 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 RGS7BPQ6MZT1 257 aaPredicted RBP13.39□□□□□ -0.27
DDR1-250ENST00000503628 RPL13AP3Q6NVV1 102 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 BCL6BQ8N143 479 aaPredicted RBP13.39□□□□□ -0.27
DDR1-250ENST00000503628 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 MCHR2Q969V1 340 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 SAMD8Q96LT4 415 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 Q96M85 177 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 FEVQ99581 238 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 FOXB1Q99853 325 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 NIPSNAP1Q9BPW8 284 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 DENND2DQ9H6A0 471 aaPredicted RBP13.39□□□□□ -0.27
DDR1-250ENST00000503628 EGLN3Q9H6Z9 239 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 GPR160Q9UJ42 338 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 CACNG2Q9Y698 323 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 CDH10Q9Y6N8 788 aa13.39□□□□□ -0.27
DDR1-250ENST00000503628 TEX13CA0A0J9YWL9 993 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 CLDN25C9JDP6 229 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 XKRYO14609 159 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 DHHO43323 396 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 PPP1R3DO95685 299 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 TXNDC12O95881 172 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 PATE4P0C8F1 98 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ZNF133P52736 654 aaPredicted RBP13.38□□□□□ -0.27
DDR1-250ENST00000503628 SELENOVP59797 346 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 COX10Q12887 443 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
DDR1-250ENST00000503628 OCLNQ16625 522 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 PCGF3Q3KNV8 242 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 MESTQ5EB52 335 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ZFP1Q6P2D0 407 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 CD300LDQ6UXZ3 194 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 USP51Q70EK9 711 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ZNF584Q8IVC4 421 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 C10orf67Q8IYJ2 551 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 CLDN22Q8N7P3 220 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 OR52L1Q8NGH7 329 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 FNDC8Q8TC99 324 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 LRTOMTQ8WZ04 291 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 RAB1CQ92928 201 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms