RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HMGB1P1B2RPK0 211 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 KCNAB3O43448 404 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SGCEO43556 437 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 TIMM8AO60220 97 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 EDF1O60869 148 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PTBP3O95758 552 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ABHD16AO95870 558 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 LIPFP07098 398 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 CD14P08571 375 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SBK2P0C263 348 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 IFI30P13284 250 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PSMB10P40306 273 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SRP9P49458 86 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 MMP16P51512 607 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 CTXN1P60606 82 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 GLO1Q04760 184 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 BAMBIQ13145 260 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 TRAM2Q15035 370 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ZMYND11Q15326 602 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 MAPRE2Q15555 327 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SLC9A3R2Q15599 337 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 KRTAP27-1Q3LI81 207 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ZNF404Q494X3 552 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PDLIM3Q53GG5 364 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 CYBRD1Q53TN4 286 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SPATA46Q5T0L3 261 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 GPR139Q6DWJ6 353 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 C16orf87Q6PH81 154 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 Q6ZR03 302 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 COLCA1Q6ZS62 124 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 MBOAT2Q6ZWT7 520 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 VASH1Q7L8A9 365 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 FAM122BQ7Z309 247 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ARPINQ7Z6K5 226 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ADCK1Q86TW2 530 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 OAFQ86UD1 273 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 C1orf87Q8N0U7 546 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PARP8Q8N3A8 854 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ICA1LQ8NDH6 482 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 OR8G5Q8NG78 346 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 OR52E2Q8NGJ4 325 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 Q8TCH9 128 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 DYDC1Q8WWB3 177 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 GEMIN6Q8WXD5 167 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ACOT11Q8WXI4 607 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 NSMAFQ92636 917 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 APOBEC3DQ96AK3 386 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 CMBLQ96DG6 245 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ZNF48Q96MX3 618 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 OR2V2Q96R30 315 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 COQ7Q99807 217 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SLC30A2Q9BRI3 323 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 SSBP3Q9BWW4 388 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 NDEL1Q9GZM8 345 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 VIPAS39Q9H9C1 493 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 UNKLQ9H9P5 680 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 NMNAT1Q9HAN9 279 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 TMEM165Q9HC07 324 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 MSL2Q9HCI7 577 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 NRIP3Q9NQ35 241 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 INTS9Q9NV88 658 aaKnown RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 VSX1Q9NZR4 365 aaPredicted RBP5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 GRHPRQ9UBQ7 328 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 ZNF69Q9UC07 566 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 EGFL7Q9UHF1 273 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 TMEM5Q9Y2B1 443 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PPIAL4AQ9Y536 164 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 POMT1Q9Y6A1 747 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 TRRAPQ9Y4A5 3859 aa5.12□□□□□ -1.59
LSM3P4-201ENST00000502948 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 A0A087WUU8 490 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 A0A0G2JK05 382 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 ELOVL7A1L3X0 281 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 LRRC30A6NM36 301 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 EFCAB9A8MZ26 197 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 SRRM5B3KS81 715 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 NDUFAB1O14561 156 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 XKRYO14609 159 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 IMPA2O14732 288 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 PHYHO14832 338 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 NDUFA2O43678 99 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 DOK2O60496 412 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 PTP4A3O75365 173 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 NDUFA7O95182 113 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 TXNDC12O95881 172 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 IFNW1P05000 195 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 SELEP16581 610 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 SDHAP31040 664 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 CD80P33681 288 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 OR1E2P47887 323 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 SEC61A1P61619 476 aaKnown RBP5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 ZBED5Q49AG3 693 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 SPRNQ5BIV9 151 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 MESTQ5EB52 335 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 RABL3Q5HYI8 236 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 DCDC5Q6ZRR9 648 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 CBLL1Q75N03 491 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 NLRC3Q7RTR2 1065 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 KLBQ86Z14 1044 aa5.11□□□□□ -1.59
LSM3P4-201ENST00000502948 GLB1L2Q8IW92 636 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms