RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PIGKQ92643 395 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 GPR137Q96N19 417 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 FOXN4Q96NZ1 517 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
NUP54-202ENST00000502850 GAREM1Q9H706 876 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 PARD6AQ9NPB6 346 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 NKIRAS2Q9NYR9 191 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 UPB1Q9UBR1 384 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 CEP250Q9BV73 2442 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 LOC102725191A0A1B0GVB3 256 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LOC390937A0A1W2PQ73 354 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 D6RAR5 112 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 TLX3O43711 291 aaPredicted RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 ICMTO60725 284 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LRP3O75074 770 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 CFIP05156 583 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ERCC1P07992 297 aaPredicted RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 CD63P08962 238 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 RAB6AP20340 208 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 DNASE1P24855 282 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LAP3P28838 519 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 VEGFCP49767 419 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 SLC35A1P78382 337 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 FMODQ06828 376 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 Q5BKY6 102 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 C1orf100Q5SVJ3 147 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LAMTOR1Q6IAA8 161 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 RAB12Q6IQ22 244 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 MTFR2Q6P444 385 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 KDM8Q8N371 416 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 OR6X1Q8NH79 312 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 OXGR1Q96P68 337 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 SORCS2Q96PQ0 1159 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 ATG5Q9H1Y0 275 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 OR10A4Q9H209 315 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 G6PC2Q9NQR9 355 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 MRPL15Q9P015 296 aaKnown RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 MGAT4AQ9UM21 535 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 DMDP11532 3685 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 TRAV18A0A075B6X5 111 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 TMEM272A0A1B0GTI8 110 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 CIB4A0PJX0 185 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ZNF878C9JN71 531 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 H0YC42 278 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 DKK1O94907 266 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ALX3O95076 343 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 IGHEP01854 428 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ALDOBP05062 364 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LPLP06858 475 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 GIPP09681 153 aaPredicted RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 TAS2R19P59542 299 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 GNG2P59768 71 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 PCOLCEQ15113 449 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LINC00303Q3SY05 128 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 LRFN4Q6PJG9 635 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 OR6N1Q8NGY5 312 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 OR2AJ1Q8NGZ0 328 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 POC1BQ8TC44 478 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 M1APQ8TC57 530 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 C11orf40Q8WZ69 217 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 GCDHQ92947 438 aaPredicted RBP10.69□□□□□ -0.7
NUP54-202ENST00000502850 SLAMF6Q96DU3 332 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 ZNF700Q9H0M5 742 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 DLL4Q9NR61 685 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 MED29Q9NX70 200 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 B3GAT1Q9P2W7 334 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 CYB5R1Q9UHQ9 305 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 POLR1DQ9Y2S0 133 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 DMXL1Q9Y485 3027 aa10.69□□□□□ -0.7
NUP54-202ENST00000502850 CABIN1Q9Y6J0 2220 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 FREM3P0C091 2139 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 PI4KAP42356 2102 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 METTL21EPA6NDL7 271 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 MPZL1O95297 269 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 TPOP07202 933 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 PGA4P0DJD7 388 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 PGA3P0DJD8 388 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 GTF2F2P13984 249 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 CXCL3P19876 107 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 HSD11B1P28845 292 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 FOXL2P58012 376 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
NUP54-202ENST00000502850 RAP2BP61225 183 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 RPS15P62841 145 aaKnown RBP10.68□□□□□ -0.7
NUP54-202ENST00000502850 FAM189A2Q15884 450 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 CSRP2Q16527 193 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 GLYATL3Q5SZD4 288 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 ZNF626Q68DY1 528 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 SEZ6L2Q6UXD5 910 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 LINC00346Q8IVM7 164 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 ELMOD2Q8IZ81 293 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 GPX8Q8TED1 209 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms