RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PNRC2Q9NPJ4 139 aaKnown RBP21.65■■□□□ 1.06
LSM6-202ENST00000502781 M0R129 80 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 PAX1P15863 534 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 RPS27P42677 84 aaKnown RBP21.64■■□□□ 1.06
LSM6-202ENST00000502781 HTR5AP47898 357 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 UCP2P55851 309 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 EFNB3Q15768 340 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 MSMPQ1L6U9 139 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 SWI5Q1ZZU3 235 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 ELFN2Q5R3F8 820 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 CFAP77Q6ZQR2 320 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 TIGD4Q8IY51 512 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 TCEANCQ8N8B7 351 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 OR2AJ1Q8NGZ0 328 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 MAP6Q96JE9 813 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 MBOAT4Q96T53 435 aa21.64■■□□□ 1.06
LSM6-202ENST00000502781 ZNF701Q9NV72 531 aaPredicted RBP21.64■■□□□ 1.06
LSM6-202ENST00000502781 TLX2O43763 284 aaPredicted RBP21.63■■□□□ 1.05
LSM6-202ENST00000502781 OR4A8P0C604 315 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 GSTT1P30711 240 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 SERPINF1P36955 418 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 KRTAP27-1Q3LI81 207 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 AADACL4Q5VUY2 407 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 VHLLQ6RSH7 139 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 ZNF101Q8IZC7 436 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 OR10S1Q8NGN2 331 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 COQ7Q99807 217 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 FOXC2Q99958 501 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 BCL2L14Q9BZR8 327 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 CXXC4Q9H2H0 198 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 TOR3AQ9H497 397 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 CXorf56Q9H5V9 222 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 DCLRE1BQ9H816 532 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 ARID1AO14497 2285 aa21.63■■□□□ 1.05
LSM6-202ENST00000502781 ZNF593O00488 134 aaPredicted RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 CASQ2O14958 399 aaPredicted RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 SMPD2O60906 423 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 FAM157BP0CG42 384 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 CCNOP22674 350 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 RAD52P43351 418 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 RPS23P62266 143 aaKnown RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 RSPO1Q2MKA7 263 aaPredicted RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 ZIK1Q3SY52 487 aaPredicted RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 KLHL12Q53G59 568 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 ZMYND19Q96E35 227 aaPredicted RBP21.62■■□□□ 1.05
LSM6-202ENST00000502781 INTS14Q96SY0 518 aa21.62■■□□□ 1.05
LSM6-202ENST00000502781 CCDC182A6NF36 153 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 DLGAP1O14490 977 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 APOFQ13790 326 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 TRIP10Q15642 601 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 NXNL2Q5VZ03 156 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 LRRC75A-AS1Q8N1F1 130 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 OR8J1Q8NGP2 316 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 SLC7A6Q92536 515 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 C4orf45Q96LM5 186 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 TEAD3Q99594 435 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 PITX2Q99697 317 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 GSX2Q9BZM3 304 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 CMAHPQ9Y471 501 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 TMEM129A0AVI4 362 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 VSTM5A8MXK1 200 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 B9A039 149 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 SPARCP09486 303 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 CDC42P60953 191 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 ECH1Q13011 328 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 TESK1Q15569 626 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 DCXRQ7Z4W1 244 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 BCDIN3DQ7Z5W3 292 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 ERI1Q8IV48 349 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 ST7LQ8TDW4 575 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 MRPL24Q96A35 216 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 RDH12Q96NR8 316 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 IL4I1Q96RQ9 567 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 DCLRE1CQ96SD1 692 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 PLK3Q9H4B4 646 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 C8orf4Q9NR00 106 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 DDX28Q9NUL7 540 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 TBCCD1Q9NVR7 557 aa21.61■■□□□ 1.05
LSM6-202ENST00000502781 EIF3KQ9UBQ5 218 aaKnown RBP21.61■■□□□ 1.05
LSM6-202ENST00000502781 NGFP01138 241 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 DBHP09172 617 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 PEX2P28328 305 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 EVX1P49640 407 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 LPCAT4Q643R3 524 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 RFPL4BQ6ZWI9 263 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 SHFQ7M4L6 423 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 DPY19L4Q7Z388 723 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 C1orf174Q8IYL3 243 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 PACRGLQ8N7B6 248 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 OR6N2Q8NGY6 317 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 TRUB1Q8WWH5 349 aaKnown RBP21.6■■□□□ 1.05
LSM6-202ENST00000502781 ATF6BQ99941 703 aa21.6■■□□□ 1.05
LSM6-202ENST00000502781 MRPL37Q9BZE1 423 aaKnown RBP21.6■■□□□ 1.05
LSM6-202ENST00000502781 PRRC2AP48634 2157 aaKnown RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 ZNF250P15622 560 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 OTX1P32242 354 aaPredicted RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 ERVS71-1P61550 626 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 RPS7P62081 194 aaKnown RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 GGTLC2Q14390 218 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 OGFRL1Q5TC84 451 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms