RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RIN1Q13671 783 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 MANEAQ5SRI9 462 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 PRAMEF9Q5VWM5 478 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 UBALD2Q8IYN6 164 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 OR1S2Q8NGQ3 325 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 OR6S1Q8NH40 331 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 ZNF251Q9BRH9 671 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 FBXO7Q9Y3I1 522 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 URGCP-MRPS24S4R325 110 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 BCAT2O15382 392 aaPredicted RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 IGHG1P01857 330 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 OMGP23515 440 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 CD38P28907 300 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 ELF4Q99607 663 aaPredicted RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 METTL9Q9H1A3 318 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 A0A087WV62 115 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 LOC107986453A0A1B0GWG9 222 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 ZNF354AO60765 605 aaPredicted RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 IL33O95760 270 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 NME1P15531 152 aaKnown RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 RBMS3Q6XE24 437 aaKnown RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 COMMD1Q8N668 190 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 C19orf12Q9NSK7 152 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 CD300LBA8K4G0 201 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 DOK2O60496 412 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 SMIM6P0DI80 62 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 EFNA3P52797 238 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 SMAD4Q13485 552 aaKnown RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 ZNF239Q16600 458 aaKnown RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 MED25Q71SY5 747 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 LGI3Q8N145 548 aa15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 CPNE4Q96A23 557 aaPredicted RBP15.67■□□□□ 0.1
HMGXB3-201ENST00000502717 ZNF587BE7ETH6 402 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 CXCL10P02778 98 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RPL27P61353 136 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 ANKRD16Q6P6B7 361 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 SNU13P55769 128 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 DHRS2Q13268 280 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 CLINT1Q14677 625 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 FAM57BQ71RH2 274 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 ZDHHC22Q8N966 263 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 SLC46A1Q96NT5 459 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 AP1S3Q96PC3 154 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 OR51B4Q9Y5P0 310 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 ST8SIA3O43173 380 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 MT-ND4LP03901 98 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 LCATP04180 440 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 ZNF136P52737 540 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RPUSD3Q6P087 351 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 DCXRQ7Z4W1 244 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 OR56B2PQ8NGI1 322 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RBMXL1Q96E39 390 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 KIR3DX1Q9H7L2 352 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 VDAC3Q9Y277 283 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 GPR31O00270 319 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 UTS2O95399 124 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RD3LP0DJH9 198 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 APEHP13798 732 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 HRH1P35367 487 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 EIF4EBP2Q13542 120 aaPredicted RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 LINC00346Q8IVM7 164 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 OR2G3Q8NGZ4 309 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 MARCH1Q8TCQ1 289 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 PAPOLGQ9BWT3 736 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 RBM24Q9BX46 236 aaKnown RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 TINAGL1Q9GZM7 467 aaPredicted RBP15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 ENY2Q9NPA8 101 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 FBXO4Q9UKT5 387 aa15.66■□□□□ 0.1
HMGXB3-201ENST00000502717 OR5K3A6NET4 321 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 FOLR1P15328 257 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 LAP3P28838 519 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 ARID1BQ8NFD5 2236 aaPredicted RBP15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 ZFPL1O95159 310 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 CNOT4O95628 575 aaKnown RBP15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 H2AFB1P0C5Y9 115 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 ALOX5APP20292 161 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 AVPR2P30518 371 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 OR1D4P47884 311 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 PLP2Q04941 152 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 SLC17A1Q14916 467 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 C15orf54Q8N8G6 183 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 OR4D11Q8NGI4 311 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 NUDCD2Q8WVJ2 157 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 EMG1Q92979 244 aaKnown RBP15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 AKR1E2Q96JD6 320 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 TSSK2Q96PF2 358 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 MAP3K3Q99759 626 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 TUBG2Q9NRH3 451 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 SIRT3Q9NTG7 399 aaPredicted RBP15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 HAO2Q9NYQ3 351 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 PLEK2Q9NYT0 353 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 TMED7-TICAM2A0A0A6YYA0 188 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 F10P00742 488 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 TK1P04183 234 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 FCGR2AP12318 317 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 FABP9Q0Z7S8 132 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 ERV3-1Q14264 604 aa15.65■□□□□ 0.1
HMGXB3-201ENST00000502717 TMEM128Q5BJH2 165 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms