RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SPAG16Q8N0X2 631 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 MCOLN3Q8TDD5 553 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 EEF1AKMT1Q8WVE0 214 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 SPRYD4Q8WW59 207 aaPredicted RBP4.56□□□□□ -1.68
NEDD4-203ENST00000502612 STARD8Q92502 1023 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 FAM3CQ92520 227 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 CCDC124Q96CT7 223 aaKnown RBP4.56□□□□□ -1.68
NEDD4-203ENST00000502612 ECHDC3Q96DC8 303 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 C12orf66Q96MD2 445 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 OR5B2Q96R09 309 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 SLC6A7Q99884 636 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 ECSITQ9BQ95 431 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 ZSCAN5AQ9BUG6 496 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 ALG12Q9BV10 488 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 TM6SF2Q9BZW4 377 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 RAB18Q9NP72 206 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 IL26Q9NPH9 171 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 SMOXQ9NWM0 555 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 NMRK1Q9NWW6 199 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 PCTPQ9UKL6 214 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 SAMD4AQ9UPU9 718 aaKnown RBP4.56□□□□□ -1.68
NEDD4-203ENST00000502612 OR10H1Q9Y4A9 318 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 COL4A6Q14031 1691 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 AGRNO00468 2067 aa4.56□□□□□ -1.68
NEDD4-203ENST00000502612 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NCF1BA6NI72 391 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NCF1CA8MVU1 366 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 C5orf67F2Z3F1 127 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CDC7O00311 574 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 UBFD1O14562 309 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CCL16O15467 120 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NIPSNAP2O75323 286 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 BCAS1O75363 584 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 STK16O75716 305 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CLDN9O95484 217 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 TSPAN12O95859 305 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 IL6P05231 212 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 UGT2B4P06133 528 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 ATP1B2P14415 290 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CD70P32970 193 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 OR3A4PP47883 348 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 RPL29P47914 159 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 SPINT3P49223 89 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 DHPSP49366 369 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CCNHP51946 323 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 IGLV3-21P80748 117 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NDUFA9Q16795 377 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CTSL3PQ5NE16 218 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 GPRC6AQ5T6X5 926 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 CLEC6AQ6EIG7 209 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 FAM199XQ6PEV8 388 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 KCNIP4Q6PIL6 250 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 IZUMO2Q6UXV1 221 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 SPATA24Q86W54 205 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 DHFR2Q86XF0 187 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 ZNF584Q8IVC4 421 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 PIANPQ8IYJ0 282 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 ST13P4Q8IZP2 240 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 TRAM1L1Q8N609 369 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 FNDC5Q8NAU1 212 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 ASZ1Q8WWH4 475 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 HAVCR1Q96D42 359 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 DUS3LQ96G46 650 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 ZNF514Q96K75 400 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 FOPNLQ96NB1 174 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 KIR2DL4Q99706 377 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NPAS2Q99743 824 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 FAM192AQ9GZU8 254 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 RMND5AQ9H871 391 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 PARVBQ9HBI1 364 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 PRR34Q9NV39 138 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 AIG1Q9NVV5 245 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 VNN3Q9NY84 501 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 APOBEC3BQ9UH17 382 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 KLHL21Q9UJP4 597 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 PTBP2Q9UKA9 531 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 RAB26Q9ULW5 256 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 SNX6Q9UNH7 406 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 TMED5Q9Y3A6 229 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 AP4S1Q9Y587 144 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 FLVCR1Q9Y5Y0 555 aa4.55□□□□□ -1.68
NEDD4-203ENST00000502612 NYNRINQ9P2P1 1898 aaKnown RBP4.55□□□□□ -1.68
NEDD4-203ENST00000502612 IGLV3-16A0A075B6K0 115 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 TSPAN11A1L157 253 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 ZNF705EA8MWA4 302 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-203ENST00000502612 G3V4G9 280 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 K7ERQ8 282 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 OR1I1O60431 355 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 EEDO75530 441 aaKnown RBP4.54□□□□□ -1.68
NEDD4-203ENST00000502612 MYO1DO94832 1006 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 IGKV3-15P01624 115 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 CATP04040 527 aaKnown RBP4.54□□□□□ -1.68
NEDD4-203ENST00000502612 CAPN1P07384 714 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 LINC00032P0C843 101 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 P0C879 139 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 PRPS2P11908 318 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 PGCP20142 388 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 VDAC1P21796 283 aa4.54□□□□□ -1.68
NEDD4-203ENST00000502612 POLR2JP52435 117 aaKnown RBP4.54□□□□□ -1.68
NEDD4-203ENST00000502612 MRPS11P82912 194 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms