RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ROPN1Q9HAT0 212 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-236ENST00000498808 TUBG2Q9NRH3 451 aa12.93□□□□□ -0.34
HDAC6-236ENST00000498808 NDRG4Q9ULP0 352 aaKnown RBP12.93□□□□□ -0.34
HDAC6-236ENST00000498808 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 ZNF816-ZNF321PA0A0X1KG74 233 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 TSPAN9O75954 239 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 TOX4O94842 621 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 OPN1SWP03999 348 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 SLC6A2P23975 617 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 PSMB10P40306 273 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 PCBD1P61457 104 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 MPP2Q14168 576 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 DCDC5Q6ZRR9 648 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 FOXL2NBQ6ZUU3 175 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 PTOV1Q86YD1 416 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 MPP4Q96JB8 637 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 MAGEB18Q96M61 343 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 WDFY2Q96P53 400 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 TRIM15Q9C019 465 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 VAPAQ9P0L0 249 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 KIF17Q9P2E2 1029 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 STX18Q9P2W9 335 aaKnown RBP12.92□□□□□ -0.34
HDAC6-236ENST00000498808 ANGPT4Q9Y264 503 aa12.92□□□□□ -0.34
HDAC6-236ENST00000498808 TRAPPC13A5PLN9 417 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 MLNRO43193 412 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 SCG5P05408 212 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 COX5BP10606 129 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 KITP10721 976 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 FUT1P19526 365 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 FUT4P22083 530 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 GUCY1A3Q02108 690 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 DHRS7BQ6IAN0 325 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-236ENST00000498808 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 PFN4Q8NHR9 129 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 SIRPDQ9H106 197 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-236ENST00000498808 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 GMEB1Q9Y692 573 aa12.91□□□□□ -0.34
HDAC6-236ENST00000498808 TRBV5-3A0A0A0MS03 114 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 NPIPB4C9JG80 1138 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 F5H5P2 479 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 OR7A10O76100 309 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 NR2C1P13056 603 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 RAC2P15153 192 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 HTR5AP47898 357 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.34
HDAC6-236ENST00000498808 HOXA4Q00056 320 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-236ENST00000498808 OXLD1Q5BKU9 147 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 MAVSQ7Z434 540 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 OR8G5Q8NG78 346 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.9□□□□□ -0.34
HDAC6-236ENST00000498808 LRTOMTQ8WZ04 291 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 PTP4A1Q93096 173 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 LHX4Q969G2 390 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 PPP1R14AQ96A00 147 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 TECTBQ96PL2 329 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 ALG12Q9BV10 488 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 DPAGT1Q9H3H5 408 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 TXNIPQ9H3M7 391 aa12.9□□□□□ -0.34
HDAC6-236ENST00000498808 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 UBDO15205 165 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 GPR37O15354 613 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 DOK2O60496 412 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 MT-ND1P03886 318 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 LIPFP07098 398 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 GPX2P18283 190 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 MSR1P21757 451 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 PPIBP23284 216 aaKnown RBP12.89□□□□□ -0.35
HDAC6-236ENST00000498808 DBPQ10586 325 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-236ENST00000498808 COX10Q12887 443 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 TOP3AQ13472 1001 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-236ENST00000498808 HERPUD1Q15011 391 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 C1orf94Q6P1W5 598 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 VASH1Q7L8A9 365 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-236ENST00000498808 SCCPDHQ8NBX0 429 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 SLC7A6Q92536 515 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 PCDHAC1Q9H158 963 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 SSU72Q9NP77 194 aaKnown RBP12.89□□□□□ -0.35
HDAC6-236ENST00000498808 EMC7Q9NPA0 242 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 C20orf141Q9NUB4 165 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 NECAP2Q9NVZ3 263 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
HDAC6-236ENST00000498808 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms