RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 CD40LGP29965 261 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 LSM6P62312 80 aaKnown RBP23■■□□□ 1.27
HOXB3-212ENST00000498678 TRIM16LQ309B1 348 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 SPANXN2Q5MJ10 180 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 PLXDC2Q6UX71 529 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 HIST2H2ABQ8IUE6 130 aaPredicted RBP23■■□□□ 1.27
HOXB3-212ENST00000498678 ORAI1Q96D31 301 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF837Q96EG3 531 aaPredicted RBP23■■□□□ 1.27
HOXB3-212ENST00000498678 NELFAQ9H3P2 528 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 GTF2A1LQ9UNN4 478 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 PHF3Q92576 2039 aaKnown RBP23■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF407Q9C0G0 2248 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 GPR171O14626 319 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 SYNGR4O95473 234 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 RAB3BP20337 219 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 MSR1P21757 451 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 GUCA1AP43080 201 aaPredicted RBP23■■□□□ 1.27
HOXB3-212ENST00000498678 SYT9Q86SS6 491 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 NABP1Q96AH0 204 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 SLC30A2Q9BRI3 323 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF416Q9BWM5 594 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 EXO5Q9H790 373 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 EMC9Q9Y3B6 208 aa23■■□□□ 1.27
HOXB3-212ENST00000498678 SRMP19623 302 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 OXA1LQ15070 435 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 C3AR1Q16581 482 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 CEP78Q5JTW2 689 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF544Q6NX49 715 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 OR51A4Q8NGJ6 313 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 GPR148Q8TDV2 347 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 SPRR3Q9UBC9 169 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 COMMD3Q9UBI1 195 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 MCTS1Q9ULC4 181 aaKnown RBP22.99■■□□□ 1.27
HOXB3-212ENST00000498678 WASF3Q9UPY6 502 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 SF3B4Q15427 424 aaKnown RBP eCLIP22.99■■□□□ 1.27
HOXB3-212ENST00000498678 IDNKQ5T6J7 187 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 DDI2Q5TDH0 399 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 SFXN4Q6P4A7 337 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 TMEM45BQ96B21 275 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 G6PC2Q9NQR9 355 aa22.99■■□□□ 1.27
HOXB3-212ENST00000498678 SOX2P48431 317 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF84P51523 738 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 RHOUQ7L0Q8 258 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 SNX29P2Q8IUI4 249 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 FNDC9Q8TBE3 224 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 SUN5Q8TC36 379 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 B3GAT2Q9NPZ5 323 aa22.98■■□□□ 1.27
HOXB3-212ENST00000498678 TMEM269A0A1B0GVZ9 245 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 LOC110117498-PIK3R3F6TDL0 507 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 RER1O15258 196 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 MAPK3P27361 379 aaPredicted RBP22.97■■□□□ 1.27
HOXB3-212ENST00000498678 DCTDP32321 178 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 IFITM3Q01628 133 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 ENDOGQ14249 297 aaKnown RBP22.97■■□□□ 1.27
HOXB3-212ENST00000498678 WDYHV1Q96HA8 205 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 PNRC2Q9NPJ4 139 aaKnown RBP22.97■■□□□ 1.27
HOXB3-212ENST00000498678 TFECO14948 347 aaPredicted RBP22.97■■□□□ 1.27
HOXB3-212ENST00000498678 CPN1P15169 458 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 THBS2P35442 1172 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 MMP16P51512 607 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 SLC25A35Q3KQZ1 300 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 ZCCHC4Q9H5U6 513 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 CRLF2Q9HC73 371 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 OR52A1Q9UKL2 312 aa22.97■■□□□ 1.27
HOXB3-212ENST00000498678 DNAJC13O75165 2243 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 ZNF878C9JN71 531 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 H3BSH0 61 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 MRPS34P82930 218 aaKnown RBP22.96■■□□□ 1.27
HOXB3-212ENST00000498678 LINGO2Q7L985 606 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 GPR137CQ8N3F9 429 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 SNIP1Q8TAD8 396 aaKnown RBP22.96■■□□□ 1.27
HOXB3-212ENST00000498678 ACOT12Q8WYK0 555 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 FAM206AQ9NX38 181 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 DAPK2Q9UIK4 370 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 TRBV5-7A0A0A0MS05 114 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 SDHBP21912 280 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 CTAG1AP78358 180 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 MZT2AQ6P582 158 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 NOSIPQ9Y314 301 aaKnown RBP22.96■■□□□ 1.27
HOXB3-212ENST00000498678 AK6Q9Y3D8 172 aaKnown RBP22.96■■□□□ 1.27
HOXB3-212ENST00000498678 V9GYH0 126 aa22.96■■□□□ 1.27
HOXB3-212ENST00000498678 DCHS1Q96JQ0 3298 aa22.95■■□□□ 1.27
HOXB3-212ENST00000498678 PPP3R1P63098 170 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 RIPPLY2Q5TAB7 128 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 IGFL3Q6UXB1 125 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 ZADH2Q8N4Q0 377 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 CPT1CQ8TCG5 803 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 TMEM106AQ96A25 262 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 KCTD12Q96CX2 325 aaKnown RBP22.95■■□□□ 1.26
HOXB3-212ENST00000498678 ALKBH3Q96Q83 286 aaPredicted RBP22.95■■□□□ 1.26
HOXB3-212ENST00000498678 PRRG4Q9BZD6 226 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 SLC25A18Q9H1K4 315 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 SSUH2Q9Y2M2 353 aa22.95■■□□□ 1.26
HOXB3-212ENST00000498678 HPGDSO60760 199 aa22.94■■□□□ 1.26
HOXB3-212ENST00000498678 IGHG3P01860 377 aa22.94■■□□□ 1.26
HOXB3-212ENST00000498678 RAF1P04049 648 aa22.94■■□□□ 1.26
HOXB3-212ENST00000498678 KLHL24Q6TFL4 600 aa22.94■■□□□ 1.26
HOXB3-212ENST00000498678 CHMP1BQ7LBR1 199 aa22.94■■□□□ 1.26
HOXB3-212ENST00000498678 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.94■■□□□ 1.26
HOXB3-212ENST00000498678 TUSC5Q8IXB3 177 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms