RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 CRYBB2P43320 205 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 LSM6P62312 80 aaKnown RBP13.7□□□□□ -0.22
NR1H3-227ENST00000498548 MS4A2Q01362 244 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 PSG7Q13046 419 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 ADCK1Q86TW2 530 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 JAZF1Q86VZ6 243 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 OR6V1Q8N148 313 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 SDR9C7Q8NEX9 313 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 C1orf159Q96HA4 380 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 WACQ9BTA9 647 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 EGLN3Q9H6Z9 239 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 POLR1DQ9Y2S0 133 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 IGLV1-36A0A0B4J1U3 117 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 PLSCR5A0PG75 271 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 RNF212BA8MTL3 300 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-227ENST00000498548 FAM107AO95990 144 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 RENP00797 406 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 CRABP1P29762 137 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 IFNGR2P38484 337 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 ERFP50548 548 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 MNAT1P51948 309 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 MRPS11P82912 194 aaKnown RBP13.69□□□□□ -0.22
NR1H3-227ENST00000498548 TSPAN31Q12999 210 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 KCNMB1Q16558 191 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 SPATS1Q496A3 300 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 CLEC12AQ5QGZ9 265 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 ARL9Q6T311 187 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-227ENST00000498548 OR52E2Q8NGJ4 325 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 CMBLQ96DG6 245 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 CLPTM1LQ96KA5 538 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 SAP30LQ9HAJ7 183 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 RPRD1BQ9NQG5 326 aaKnown RBP13.69□□□□□ -0.22
NR1H3-227ENST00000498548 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 VNN3Q9NY84 501 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 TMEFF2Q9UIK5 374 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-227ENST00000498548 KLHL21Q9UJP4 597 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
NR1H3-227ENST00000498548 OR6C68A6NDL8 312 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 ARPC3O15145 178 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 PHF1O43189 567 aaPredicted RBP13.68□□□□□ -0.22
NR1H3-227ENST00000498548 ICMTO60725 284 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 GASTP01350 101 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 GAAP10253 952 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 NOS3P29474 1203 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 HMGA2P52926 109 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 LMO4P61968 165 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 TEKQ02763 1124 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 GABPB1Q06547 395 aaPredicted RBP13.68□□□□□ -0.22
NR1H3-227ENST00000498548 MTX3Q5HYI7 312 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 DNM1P34Q6PK57 102 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 DHFR2Q86XF0 187 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 LINC00346Q8IVM7 164 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 OR4C15Q8NGM1 316 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 CCL17Q92583 94 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 BTBD10Q9BSF8 475 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 PTTG3PQ9NZH4 202 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 PURGQ9UJV8 347 aaKnown RBP13.68□□□□□ -0.22
NR1H3-227ENST00000498548 LHFPL6Q9Y693 200 aa13.68□□□□□ -0.22
NR1H3-227ENST00000498548 DYSFO75923 2080 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 OR6C6A6NF89 314 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 B4DSR2 109 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 KRT36O76013 467 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 TFP02787 698 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 HNF1AP20823 631 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 CALB2P22676 271 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
NR1H3-227ENST00000498548 HFEQ30201 348 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 Q6ZR03 302 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 C1orf174Q8IYL3 243 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 OR5AS1Q8N127 324 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 ELMOD3Q96FG2 381 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 U3KQV3 271 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 FBN1P35555 2871 aaKnown RBP13.67□□□□□ -0.22
NR1H3-227ENST00000498548 TANC2Q9HCD6 1990 aa13.67□□□□□ -0.22
NR1H3-227ENST00000498548 CLDN25C9JDP6 229 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 H3BSA7 217 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 CCNB2O95067 398 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 HLA-DQA2P01906 255 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 GSTM3P21266 225 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 PYCR1P32322 319 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 DVL1P1P54792 670 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-227ENST00000498548 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 TNFAIP6P98066 277 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-227ENST00000498548 TRIM25Q14258 630 aaKnown RBP13.66□□□□□ -0.22
NR1H3-227ENST00000498548 HLXQ14774 488 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-227ENST00000498548 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
NR1H3-227ENST00000498548 FAM209AQ5JX71 171 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 LCN8Q6JVE9 175 aa13.66□□□□□ -0.22
NR1H3-227ENST00000498548 HIST2H3AQ71DI3 136 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms