RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 HAVCR1Q96D42 359 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 TMEM246Q9BRR3 403 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 POLE4Q9NR33 117 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 RIMS3Q9UJD0 308 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 MED31Q9Y3C7 131 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 IGHV3-64DA0A0J9YX35 117 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 KIR2DS1A0A191URI9 304 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 H7C1C5 153 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 M0QZ24 198 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 NDUFA7O95182 113 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 CRYBA1P05813 215 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 COX5BP10606 129 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 TUBG1P23258 451 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-212ENST00000498540 GZMMP51124 257 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 CTXN1P60606 82 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 FGF12P61328 243 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 LCN6P62502 163 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 GUCY1A3Q02108 690 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 FAM201AQ5SY85 155 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 INTS11Q5TA45 600 aaKnown RBP12.26□□□□□ -0.45
TRAF4-212ENST00000498540 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 C1orf94Q6P1W5 598 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 Q6YL49 198 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-212ENST00000498540 FITM2Q8N6M3 262 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 ATG16L2Q8NAA4 619 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 FNDC8Q8TC99 324 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 RASSF5Q8WWW0 418 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 TLCD1Q96CP7 247 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-212ENST00000498540 MEGF10Q96KG7 1140 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
TRAF4-212ENST00000498540 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 MIOXQ9UGB7 285 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 RAB21Q9UL25 225 aa12.26□□□□□ -0.45
TRAF4-212ENST00000498540 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 H0YL77 283 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 SGCEO43556 437 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 CPT2P23786 658 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 OR1E2P47887 323 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 PITPNBP48739 271 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 HLXQ14774 488 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-212ENST00000498540 VMACQ2NL98 169 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 OTPQ5XKR4 325 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 ASPHD2Q6ICH7 369 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 CCDC80Q76M96 950 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 C1QL4Q86Z23 238 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 MICU2Q8IYU8 434 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 OR8B3Q8NGG8 313 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 PLEKHA8Q96JA3 519 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 OR8B2Q96RD0 313 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 RBM4BQ9BQ04 359 aaKnown RBP12.25□□□□□ -0.45
TRAF4-212ENST00000498540 CDADC1Q9BWV3 514 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 NDUFAF1Q9Y375 327 aa12.25□□□□□ -0.45
TRAF4-212ENST00000498540 TRAV27A0A087WT01 109 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 C22orf46C9J442 243 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 IFNL4K9M1U5 179 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 TIMM23O14925 209 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 ANGPT2O15123 496 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 MLNRO43193 412 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 MELTFP08582 738 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 IFI30P13284 250 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 RAC2P15153 192 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 SELEP16581 610 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 FUT4P22083 530 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 FHL1Q13642 323 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 NFYCQ13952 458 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 GPR157Q5UAW9 335 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 FAM205BPQ63HN1 556 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 MOGAT3Q86VF5 341 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 C10orf82Q8WW14 230 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 PTP4A1Q93096 173 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 UBE2FQ969M7 185 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 BPIFA2Q96DR5 249 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 POLR2J2Q9GZM3 115 aaKnown RBP12.24□□□□□ -0.45
TRAF4-212ENST00000498540 POLR2J3Q9H1A7 115 aaKnown RBP12.24□□□□□ -0.45
TRAF4-212ENST00000498540 NOX4Q9NPH5 578 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 PTTG3PQ9NZH4 202 aa12.24□□□□□ -0.45
TRAF4-212ENST00000498540 A6NIZ1 184 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 F5H5P2 479 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 TSPAN15O95858 294 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 SFTPBP07988 381 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 DBHP09172 617 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 PMELP40967 661 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 RAP1BP61224 184 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 RAP1AP62834 184 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-212ENST00000498540 LYPD2Q6UXB3 125 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 TMEM86BQ8N661 226 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 COG8Q96MW5 612 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 PCGF1Q9BSM1 259 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms