RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZNF420Q8TAQ5 688 aaPredicted RBP13.44□□□□□ -0.26
MUC1-220ENST00000498431 RBP7Q96R05 134 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 GCM1Q9NP62 436 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 EMC7Q9NPA0 242 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 MAN2C1Q9NTJ4 1040 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 CAPN7Q9Y6W3 813 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 DOCK11Q5JSL3 2073 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 H7C1C5 153 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 DCTN3O75935 186 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 KNG1P01042 644 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 NR2C1P13056 603 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 RPS2P15880 293 aaKnown RBP13.43□□□□□ -0.26
MUC1-220ENST00000498431 MSR1P21757 451 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 FUT4P22083 530 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 PCBD1P61457 104 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 LCN6P62502 163 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 MAPRE2Q15555 327 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 KLBQ86Z14 1044 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 SLC30A8Q8IWU4 369 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 OR5AS1Q8N127 324 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 MUC20Q8N307 709 aaPredicted RBP13.43□□□□□ -0.26
MUC1-220ENST00000498431 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 TSPEARQ8WU66 669 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 SLC7A6Q92536 515 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 MYLK2Q9H1R3 596 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 TMEM165Q9HC07 324 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 POLE4Q9NR33 117 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 TBCCD1Q9NVR7 557 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 IL20RAQ9UHF4 553 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 HIF3AQ9Y2N7 669 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 NDUFAF1Q9Y375 327 aa13.43□□□□□ -0.26
MUC1-220ENST00000498431 IGHV3-64DA0A0J9YX35 117 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 OR5F1O95221 314 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 CYB5R3P00387 301 aaPredicted RBP13.42□□□□□ -0.26
MUC1-220ENST00000498431 OR1E2P47887 323 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 HTR5AP47898 357 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 CTXN1P60606 82 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 VMACQ2NL98 169 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 INTS11Q5TA45 600 aaKnown RBP13.42□□□□□ -0.26
MUC1-220ENST00000498431 OTPQ5XKR4 325 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 ARL9Q6T311 187 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 BTNL3Q6UXE8 466 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 CCDC80Q76M96 950 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 RHOUQ7L0Q8 258 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 MICU2Q8IYU8 434 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 LRRC75AQ8NAA5 344 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 OR10AD1Q8NGE0 317 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 OR10S1Q8NGN2 331 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 HAVCR1Q96D42 359 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 MARCH7Q9H992 704 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 ARMCX1Q9P291 453 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 NDRG4Q9ULP0 352 aaKnown RBP13.42□□□□□ -0.26
MUC1-220ENST00000498431 MED31Q9Y3C7 131 aa13.42□□□□□ -0.26
MUC1-220ENST00000498431 C12orf71A8MTZ7 269 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 SRRM5B3KS81 715 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 H0YL77 283 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 DOK2O60496 412 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 COX5BP10606 129 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 RAG2P55895 527 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 GNB2P62879 340 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 CBX1P83916 185 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 FHL1Q13642 323 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 NFYCQ13952 458 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 HLXQ14774 488 aaPredicted RBP13.41□□□□□ -0.26
MUC1-220ENST00000498431 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 C1orf94Q6P1W5 598 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 FIP1L1Q6UN15 594 aaKnown RBP13.41□□□□□ -0.26
MUC1-220ENST00000498431 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
MUC1-220ENST00000498431 SYT9Q86SS6 491 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 RASSF5Q8WWW0 418 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 CITED1Q99966 193 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 C1RLQ9NZP8 487 aa13.41□□□□□ -0.26
MUC1-220ENST00000498431 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 ANGPT2O15123 496 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 SURF4O15260 269 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 SGCEO43556 437 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 IFI30P13284 250 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 SELEP16581 610 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 GUCA1AP43080 201 aaPredicted RBP13.4□□□□□ -0.26
MUC1-220ENST00000498431 CYLC2Q14093 348 aaPredicted RBP13.4□□□□□ -0.26
MUC1-220ENST00000498431 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 OLFML2AQ68BL7 652 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 SLC27A4Q6P1M0 643 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 BRICD5Q6PL45 260 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 C17orf107Q6ZR85 190 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 ATG16L2Q8NAA4 619 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 BPIFA2Q96DR5 249 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 MEGF10Q96KG7 1140 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 CDADC1Q9BWV3 514 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 CHIAQ9BZP6 476 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 BEX1Q9HBH7 125 aa13.4□□□□□ -0.26
MUC1-220ENST00000498431 KIR2DS1A0A191URI9 304 aa13.39□□□□□ -0.27
MUC1-220ENST00000498431 A0A1B0GUS0 222 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms